| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4116 |
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| Symbol | |
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| ID | 6204279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5329364 |
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| End bp | 5330380 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693784 |
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| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
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| Protein accession | YP_001820990 |
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| Protein GI | 182415924 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.890746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCC TGCGAAAATC TCCGTGGATC ATCCACTATG ACGCCTCGAG TTGCAATGGC
TGCGACATCG AGACGCTCGC CTGCCTGACG CCGCTCTACG ACGTGGAGCG ACTCGGCGTG
ATCAACACCG GCAATCCGAA GCACGCCGAC ATCTTCCTGG TGACCGGCGC CGTCAACGAG
CAGAGCAAGG AAGTCATCCG TAACATCTAC CACCAGCTGC CCGAGCCGAA GGTCGTGGTC
GCGATCGGCG TCTGCGCGTC GAGCGGCGGG ATTTTCCGCG ATTGCTACAA CATCGCCGGC
GGCGTCGATC GCGTCATACC GGTCGATGTT TACGTGCCCG GCTGCGCCGC GCGGCCCGAG
GCGATCATCG ACGGCGTGGT GCAGGCGCTC GGCGTGTTGG AGCGCAAGCA GAGCGAGATG
AGCGCGCTCG CGAACTGCAT CGATCGGATT CTCTACCTGC GGGCGACGAA GGCGGACGCC
GCCGAAATCC TCGTGCTGCA AAAGATCGCC TATCAAACGG AGATCGAGCT CTACGGCGAC
GACAGCCTGC CGCCGATGCA GCAAACCCTC GAGGAGCTGG AGCACGATTT CGAGCACGTG
CCGGTGAACG CGCCGTCGCT GCTGCCGGCC GACCGCGACC TCGCCGCGGC GCCCGCCGCA
CCCGCTCGGA TCGTTTTCCT GAAGGCGGTA ATCAACGGGA AAATCATCGG CTCGATCCGC
GGTTATCAGC TCGGCGACAC CGCTTATCTC AGCCGGATGA TCGTGCATCC GTACTTCCGT
CGCCGCGGTG TCGGCCGGCG GTTGCTGCCG GAGATCGAGA AGGCGTTCCC CACGGCGCGC
CGGTTCGAGG CGAACACCGG CCATCAGAGC AAGCGCAACC ACTACCAGCT CACGCAACTG
GGCTACCGGC AGTTCAAGAC CGAGCCGCTC ACGCCCACGA TCACGCTCGT GTACTTCGAA
AAACTGCGGC CGGCCGGGAC CAGCGGCTCT CGTCCGCCCA TCCTCGTCTC CAGCTAG
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| Protein sequence | MLGLRKSPWI IHYDASSCNG CDIETLACLT PLYDVERLGV INTGNPKHAD IFLVTGAVNE
QSKEVIRNIY HQLPEPKVVV AIGVCASSGG IFRDCYNIAG GVDRVIPVDV YVPGCAARPE
AIIDGVVQAL GVLERKQSEM SALANCIDRI LYLRATKADA AEILVLQKIA YQTEIELYGD
DSLPPMQQTL EELEHDFEHV PVNAPSLLPA DRDLAAAPAA PARIVFLKAV INGKIIGSIR
GYQLGDTAYL SRMIVHPYFR RRGVGRRLLP EIEKAFPTAR RFEANTGHQS KRNHYQLTQL
GYRQFKTEPL TPTITLVYFE KLRPAGTSGS RPPILVSS
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