| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4097 |
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| Symbol | |
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| ID | 6204576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5309224 |
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| End bp | 5310171 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693765 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_001820971 |
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| Protein GI | 182415905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.64867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTC TCCTCGGCTC GCTCACCAAC GCCTTTCCCG TCTGGGTCGT CGCACTGTCG
GTCGTCGCGT TGTTCGAGCC CGGCTGGTTC ACCTGGTTTA GCGGTCCGTG GATCGTGTGG
GGGCTCGCCG TGATCATGCT CGGTATGGGC CTGACGCTGA AGCTCGACGA TTTCCGGGCG
ATCGGCCGGA TGCCCAAGGC CGTGGCGCTC GGATTCATCG CGCAATACAC GATCATGCCG
CTGCTGGGGT GGGCGTTTGC GCATCTTTAC GGACTCGAGC GGCCGTTCGC GGTGGGGCTG
ATCCTCGTGG CCTGCTGTCC GGGAGGCACC GCTTCGAATG TCGTGACCTA TCTCGCCCGC
GCCAACGTCT GCCTCTCGGT CGTGATGACG ATGTGCTCGA CGTTCGCCGC GGTGGTGATG
ACCCCGCTGC TGACCTCCGT GCTGGCGGGC ACGTTCGTGC ATGTGGACGC GTGGGGTTTG
TTTCGCAGCA CGTTCCAGGT GGTCGTCCTG CCGCTGGTGA TCGGCGTCGT CGCCAATCGC
ATGGCGCCAC AACTGATGCG GCGCGCGCAA CTCGGGCTGC CGCTGCTCTC CGTTCTCACG
ATTGCGTTGA TCTGCGCCAG CATCATCGGA GGCAGCGCCG AGGCGATCCG CGGTTCCGCG
CTCCGGCTGC TGGCGGCCGT GTTCAGCCTG CACGCCGGCG GATTCGCGAT CGGCTACGTG
GCGGCCCGGC TCGCGCGCTG GGACAAGATC GTCGCCCGCA CCGTTTCGAT CGAGGTGGGC
ATGCAGAACT CAGGCCTCGG CGTCGTGCTC GCGCGCAGCC ATTTCGCCGA CCCGCTCACG
GCCGTGCCGT GCGCCATCTC GAGCGTGTTT CACTCGGTGA TCGGAAGCCT GCTCGCCGGC
TGGTGGCGCT GGCGCGACCG GCCGAGAAAT GGCGGCGCGC GAGCGTAG
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| Protein sequence | MTRLLGSLTN AFPVWVVALS VVALFEPGWF TWFSGPWIVW GLAVIMLGMG LTLKLDDFRA
IGRMPKAVAL GFIAQYTIMP LLGWAFAHLY GLERPFAVGL ILVACCPGGT ASNVVTYLAR
ANVCLSVVMT MCSTFAAVVM TPLLTSVLAG TFVHVDAWGL FRSTFQVVVL PLVIGVVANR
MAPQLMRRAQ LGLPLLSVLT IALICASIIG GSAEAIRGSA LRLLAAVFSL HAGGFAIGYV
AARLARWDKI VARTVSIEVG MQNSGLGVVL ARSHFADPLT AVPCAISSVF HSVIGSLLAG
WWRWRDRPRN GGARA
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