| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4085 |
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| Symbol | |
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| ID | 6207456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5291040 |
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| End bp | 5293331 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693753 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820959 |
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| Protein GI | 182415893 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.128468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.559819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT CCACTCCCAT GGTTCCGTGC CGCCGGCGCT ATCCGTTGCT CTTCCAGCTC
GGCCGGCAGG TCGATGCCGC CACGCCGCCG ACGCGCTGGG TGCCCGCGCA TGTGCCTGGA
GCCGTGCAGC TCGACTGGGC GCGAGCGACG GGCCTGCATG ACTACACAGT AGGCGACAAC
GTGAAGCAGT GGGCAGATCT CGACGAATCG TACTGGACCT ACCGTTCGAC GATCGACGGC
GTGCCGCTGA TGGGCGAGGG CGAGCGGCTG TATTTGGTTT TCGAAGGCAT CGACTACGCG
GGTGAGATCG GACTCGACGG CCGGCAGCTG TGTGCGTTCG CCGGGATGCA GACGCCGATC
GCGTGCGACG TCACGGGCCG GCTGCGCGCG GGCTCGGTCG TGACCGTCCA TCTGGCCCCT
GCGCCGAAGT CGCGGCCGGA GCCGCGGGAT CGGACGCAGG CGGACGCGAC GTGCAAGCCC
GCGGTCAGCT ATGGCTGGGA TTTTCATCCG CGGCTGATCC CGCTCGGGAT CTGGCGCGAG
GCCTATCTCG ACGTGCGGCC GGCGGTGCAC TTCGCGGAGC CGCCGCACGT GAACTACGAG
CTGAGCGATG ACCTGACGGT CGCCCGCGGC GCGGTCGAGG TGAGGTTGAA CCGCGCAACG
GTCGGGCCGG GTTGGAGAAT CCGATGGACG CTCACGGCGC CGGACGGATC CGCAGCGCTG
CAGCAAGAGC TTCTGTTGGA GAACGGCGTC ACGCGCGCAG CGCTGCCGTT TTCGCTGGCG
AAGGTTTTGC TGTGGTGGCC GCACGATCAG GGCACGCCGA TACTCTATGC CAGTCGCGTG
GAATTGATCG GCCCGGGCGG CACGGTCGTC GATCGCATCG AGGCGAGAGT GGGTTTTCGG
CGTGTGCGGC TAGTGATGGC GCCGGACCAG TGGAAACATC CTGGCCCGAC GGACTTTCCC
AAGTCACGCA GCTATCCGCC GGTGACGCTC GAGATCAACG GGCGGGCGAC TTTTGCGAAG
GGTTCGAACT GGGTTGGCCC GGACATCTTT CCAGGCGCGG TGACCGCGGA GCGATTGAAG
GCGCAGCTGA CGCTCGCGCG CGGAGCGAAC TTCAACCTGC TGCGGATGTG GGGTGGAGCG
GCGGCGCCGC AGGATCTGTT CTACGAACTC TGCGACGAAC TCGGGATCAT GGTGTGGCAG
GAGTTCCCGC TGGCGTGTAA TCGCTATCCT GACACGCGCG ACTATCTCGT GGAGTTGGAT
CGCGAGTCGC GCAGCTTGAT CGTGCGCTTG CGCCCGCATG CGGCGGTCGT GCTCTGGTGC
GGCGGCAACG AGCTTTTCAA TTCGTGGTCC GGCATGACTG ACCAATCGCG GGCGCTGCGG
TTGCTGAATC GGAATTGCTA CGAGCTCGAT CCGGCGCGGC CGTTCCTCGC GTCGTCGCCC
GTGGAAGGCG TGGGACACGG GCATTATGTT TTCCGCGACC CGATCACGGG CCGTGAAGGT
TGGGAGATGT TTCAGGCTGC GCGTTGCACG GCCTATACCG AGTTCGGCTG TCCGGCGACG
CCCTCGGCGG ACACGCTTCG GCGGATCCTG CCGGGCGACG AGCTCTGGCC GCCGCGTGCC
GGCACCGCGT GGGAGACGCA TCACGCGTTT GGTGCGTGGC TGCCCTCGAG CCATCTCTAT
CTCGAGGAGA TCGAACACTA CTTCGGCCCG AGCGATTCGC TTGAGCAACT CGTCGAGCGG
GCGCAGTTGC TGCAAAGCGA AGGGCTGCGG GGGATGTTCG AAGAAGCACG GCGGCAGAAG
CCGGTGGCGA GCATGGCGCT GAACTGGTGT TTCAACGAGC CCTGGCCGGG CGCGGCGAAC
AACAGTCTCG TCGCCTGGCC GTGCGAGCCG AAGCCGGCGC TGGTCGCCGT GGGTGAAGCG
TGCCGGCCCA CGCTGGCGAG CGCGAGGGTC CGGAAGTTTT CCTGGTCGCC GGGCGAGGTT
TTCGATCCGG AGTTGTGGCT CCTGCACGAC GGACCAGATG TTGGGCCCGG CGTCGAGATC
GTCGCATGGC TCGAAAGCGA TGGGGCGCGC CAGCGGCTCG GCAGCTGGGC CACCACTGAG
CTTGAGCCGA ATCAGAATCA GCGCGGACCT TGTCTGGAGT TTACCCTGCC AGAGTGGGCC
GGGCCGCGAT TCACGCTCCG ACTGGAAGTC GCCGCACAGC CGGGATGGAA CACCTCCTAC
ACGTTGATCA AGGCACGCGG CGAGGAGACC AAGCGTGACG TCGTCGTACC GCAGGGCGCG
ACGAACTTCT GA
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| Protein sequence | MSRSTPMVPC RRRYPLLFQL GRQVDAATPP TRWVPAHVPG AVQLDWARAT GLHDYTVGDN
VKQWADLDES YWTYRSTIDG VPLMGEGERL YLVFEGIDYA GEIGLDGRQL CAFAGMQTPI
ACDVTGRLRA GSVVTVHLAP APKSRPEPRD RTQADATCKP AVSYGWDFHP RLIPLGIWRE
AYLDVRPAVH FAEPPHVNYE LSDDLTVARG AVEVRLNRAT VGPGWRIRWT LTAPDGSAAL
QQELLLENGV TRAALPFSLA KVLLWWPHDQ GTPILYASRV ELIGPGGTVV DRIEARVGFR
RVRLVMAPDQ WKHPGPTDFP KSRSYPPVTL EINGRATFAK GSNWVGPDIF PGAVTAERLK
AQLTLARGAN FNLLRMWGGA AAPQDLFYEL CDELGIMVWQ EFPLACNRYP DTRDYLVELD
RESRSLIVRL RPHAAVVLWC GGNELFNSWS GMTDQSRALR LLNRNCYELD PARPFLASSP
VEGVGHGHYV FRDPITGREG WEMFQAARCT AYTEFGCPAT PSADTLRRIL PGDELWPPRA
GTAWETHHAF GAWLPSSHLY LEEIEHYFGP SDSLEQLVER AQLLQSEGLR GMFEEARRQK
PVASMALNWC FNEPWPGAAN NSLVAWPCEP KPALVAVGEA CRPTLASARV RKFSWSPGEV
FDPELWLLHD GPDVGPGVEI VAWLESDGAR QRLGSWATTE LEPNQNQRGP CLEFTLPEWA
GPRFTLRLEV AAQPGWNTSY TLIKARGEET KRDVVVPQGA TNF
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