Gene Oter_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4062 
Symbol 
ID6204558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5263882 
End bp5265015 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID641693730 
Productpermease 
Protein accessionYP_001820936 
Protein GI182415870 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.78082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.984142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC AGCCCGATTC AGCGACGACT GCATCCACAC CGGCATCGCC GTCTCTTGAT 
GGCATTGCGC CGGACATCGC CCAGGTCGGC GGCCGCCCGA CGCGCAGTTT CCCGTACGCC
CGGCTGGGTC TCGCGCTCGT CGGACTCGTG GGCTGGTGGC TGGTGTATCG AAACCTCGCG
CCGGCGTCCC GCTGGCTGAC TTACCAAGTC TTCGGGCTGG AGCGCGACTC CGCCCTCGGT
TCAGCGGTCG AGTTCTTCCT CTACGACACG CCGAAGGTGC TGCTGCTGCT GGTGCTGGTC
GTCTTCGGCG TGGGCGTGGT GCGCACCTTC TTCACTCCCG CCCGCACGCG TCGGCTGCTG
GCGGGACGGC GGGAATCGGC TGGCAATGTC TTCGCGGCGC TCCTGGGGAC CGTCACGCCG
TTCTGCTCGT GTTCGGCCGT GCCGCTGTTC ATCGGGTTCG TCACTGCCGG AGTGCCCTTG
GGCGTGACGT TTTCGTTCCT CATTTCGGCG CCGCTGGTTA ATGAGGTCGC GCTGGTCCTG
CTGTTCGGGA TGTTCGGCTG GAAGGTGGCC GCGCTCTATC TTGGCATGGG TTTGCTCGTG
GCAATTGCCG CCGGTTGGAC GCTGGGCCGG TTGAAACTCG AGCGGCACGT CGAACCGTGG
GTATTTGAAA ACCTCTCCGG CACCGGCGCA TCAGGTGGCG ACGACGGCGC TCCGATAGCC
TGGTCCGATC GCGTTCGCGC GGGCGTAACC GCGGTGCGTG AGATCGTTGG CAAAGTCTGG
ATCTACGTGC TGCTCGGGAT CGCGGTCGGC GCGGGCATCC ACGGCTACGT CCCCGAGAAC
CTCATGGCCT CGATCATGGG CCGCGACGCG TGGTGGTCCG TCCCGCTCGC GGTGCTGCTC
GGCGTGCCCA TGTACACGAA CGCCGCGGGC GTCATTCCGG TTGTGCAGGC GCTGCTCGGC
AAGGGCGCCG CGCTGGGCAC GGTGCTGGCG TTCATGATGG CGGTGATCGG CCTGTCGCTG
CCGGAGGCGA TCATCCTGCG CCAGGTGCTG AAGCCGCGCC TGATCGCGGC GTTTTTTGGC
GTGGTGGCGA GCGGCATTCT GCTCGTGGGC TACCTTTTCA ACGCGCTGCT CTGA
 
Protein sequence
MSAQPDSATT ASTPASPSLD GIAPDIAQVG GRPTRSFPYA RLGLALVGLV GWWLVYRNLA 
PASRWLTYQV FGLERDSALG SAVEFFLYDT PKVLLLLVLV VFGVGVVRTF FTPARTRRLL
AGRRESAGNV FAALLGTVTP FCSCSAVPLF IGFVTAGVPL GVTFSFLISA PLVNEVALVL
LFGMFGWKVA ALYLGMGLLV AIAAGWTLGR LKLERHVEPW VFENLSGTGA SGGDDGAPIA
WSDRVRAGVT AVREIVGKVW IYVLLGIAVG AGIHGYVPEN LMASIMGRDA WWSVPLAVLL
GVPMYTNAAG VIPVVQALLG KGAALGTVLA FMMAVIGLSL PEAIILRQVL KPRLIAAFFG
VVASGILLVG YLFNALL