Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4062 |
Symbol | |
ID | 6204558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5263882 |
End bp | 5265015 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693730 |
Product | permease |
Protein accession | YP_001820936 |
Protein GI | 182415870 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.78082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.984142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCC AGCCCGATTC AGCGACGACT GCATCCACAC CGGCATCGCC GTCTCTTGAT GGCATTGCGC CGGACATCGC CCAGGTCGGC GGCCGCCCGA CGCGCAGTTT CCCGTACGCC CGGCTGGGTC TCGCGCTCGT CGGACTCGTG GGCTGGTGGC TGGTGTATCG AAACCTCGCG CCGGCGTCCC GCTGGCTGAC TTACCAAGTC TTCGGGCTGG AGCGCGACTC CGCCCTCGGT TCAGCGGTCG AGTTCTTCCT CTACGACACG CCGAAGGTGC TGCTGCTGCT GGTGCTGGTC GTCTTCGGCG TGGGCGTGGT GCGCACCTTC TTCACTCCCG CCCGCACGCG TCGGCTGCTG GCGGGACGGC GGGAATCGGC TGGCAATGTC TTCGCGGCGC TCCTGGGGAC CGTCACGCCG TTCTGCTCGT GTTCGGCCGT GCCGCTGTTC ATCGGGTTCG TCACTGCCGG AGTGCCCTTG GGCGTGACGT TTTCGTTCCT CATTTCGGCG CCGCTGGTTA ATGAGGTCGC GCTGGTCCTG CTGTTCGGGA TGTTCGGCTG GAAGGTGGCC GCGCTCTATC TTGGCATGGG TTTGCTCGTG GCAATTGCCG CCGGTTGGAC GCTGGGCCGG TTGAAACTCG AGCGGCACGT CGAACCGTGG GTATTTGAAA ACCTCTCCGG CACCGGCGCA TCAGGTGGCG ACGACGGCGC TCCGATAGCC TGGTCCGATC GCGTTCGCGC GGGCGTAACC GCGGTGCGTG AGATCGTTGG CAAAGTCTGG ATCTACGTGC TGCTCGGGAT CGCGGTCGGC GCGGGCATCC ACGGCTACGT CCCCGAGAAC CTCATGGCCT CGATCATGGG CCGCGACGCG TGGTGGTCCG TCCCGCTCGC GGTGCTGCTC GGCGTGCCCA TGTACACGAA CGCCGCGGGC GTCATTCCGG TTGTGCAGGC GCTGCTCGGC AAGGGCGCCG CGCTGGGCAC GGTGCTGGCG TTCATGATGG CGGTGATCGG CCTGTCGCTG CCGGAGGCGA TCATCCTGCG CCAGGTGCTG AAGCCGCGCC TGATCGCGGC GTTTTTTGGC GTGGTGGCGA GCGGCATTCT GCTCGTGGGC TACCTTTTCA ACGCGCTGCT CTGA
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Protein sequence | MSAQPDSATT ASTPASPSLD GIAPDIAQVG GRPTRSFPYA RLGLALVGLV GWWLVYRNLA PASRWLTYQV FGLERDSALG SAVEFFLYDT PKVLLLLVLV VFGVGVVRTF FTPARTRRLL AGRRESAGNV FAALLGTVTP FCSCSAVPLF IGFVTAGVPL GVTFSFLISA PLVNEVALVL LFGMFGWKVA ALYLGMGLLV AIAAGWTLGR LKLERHVEPW VFENLSGTGA SGGDDGAPIA WSDRVRAGVT AVREIVGKVW IYVLLGIAVG AGIHGYVPEN LMASIMGRDA WWSVPLAVLL GVPMYTNAAG VIPVVQALLG KGAALGTVLA FMMAVIGLSL PEAIILRQVL KPRLIAAFFG VVASGILLVG YLFNALL
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