| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4039 |
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| Symbol | |
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| ID | 6204909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5238395 |
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| End bp | 5239726 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693707 |
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| Product | Na+ dependent nucleoside transporter |
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| Protein accession | YP_001820913 |
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| Protein GI | 182415847 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.17654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.283567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA TCCTTCACCT CGGCCGCGGC TTTTTTGGCA TCGCGGTTTT TTTGGCGATC
GCCGTCGCCC TGAGCGAAAA CCGCCGCGCC ATCAGCTGGC GGCTGATCGC CACCGGCGTC
GCGCTGCAAT TCACCTTTGC CGCACTCGTG CTCTACTTCG CTCCGGCGCG CATCGTCATC
GAGTGGATTG GCTCCCGCTT CGTCGACCTG CTCGGTTTCA CCAACGCCGG CGTCGAGATG
CTGTTCGGCT CACTCGCCGA CAAGTCAAAG CACGGCGTGC TCTTCGCGAT TCAGGTTCTT
CCCTCGATCA TCTTCTTCTC CGCTTTCTCG TCGCTGCTCT ACTACCTCGG CATCCTGCAA
AAGATCGTGT TCGTGTTCGC CTGGGTGATG TCGAAGACGA TGCGGCTCTC CGGCGCGGAA
ACCCTCAGCG CCTCGGCCAA CATTTTCCTC GGCCAAACCG AGGCGCCGTT CCTGATCAAG
CCATACCTGC CGACGATGAC GCGCTCGGAG ATGCTCACCA TCATGACGGG CGGCATGGCG
ACGATCGCGG GCGCCGTGAT GATCGCCTAC ATTGCATTCC TCGGCGGCGA TGATCCGCAG
CAGCAGGTGC TGTTCGCCAC GCATCTCATC ACCGCGTCGG TGATCAACGC GCCCGCCGGG
CTCATGCTTT CCAAAATCCT GCTGCCGCAG ACGGAGCCGG TGAGCACGGA CCTCAATGTC
TCCAAGGAGC GGATCGGCTC GAACCTGGTT GACGCGGTCT GCGTCGGCAC GACCGACGGC
CTCAAGCTCG CCGTCAACGT GGGCGCCATG TTGATCGCAT TCACCGCGCT GATCGCAATG
CTCAACGCCT TGCTTGGCTG GTTCGGCAGC CCGCACGATC TGGTGATCGG CGGCGCCACG
CTCGTGCACT ACCCGGGGCT GAACGCCTGG ATCCGGGAGG TGACCGACGG CGCGTTTCAA
AGCTTCTCGC TCGAGTTGCT GTTCGGACTC GTCTACGCGC CGATTGCCTG GCTGCTCGGC
ATAGACTTGG GTCATTTGCT TCAGTCGGGC GCGCTCCTCG GCACCCGCAC GGTGCTCAAC
GAATTCATCT CGTTCTCGCA ACTCGCCGGC CTGAAGTCCT CCGGCGCGCT CACCGACGCG
CGCACGATCA TCATTCTCAC CTACGCGATG TGCGGGTTCG CCAACATCGT CTCCATTGGC
ATACAGATCG GCGGCATCGG TGCACTCGCG CCGAACCAGC GCTCCAACCT CGCGCAACTC
GGCGTGAAGG CCATGATCGG CGGCACGCTC GCGTGCTACC TCTCCGCGTG CGTCGCCGGG
ATCCTGACGT AG
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| Protein sequence | MDFILHLGRG FFGIAVFLAI AVALSENRRA ISWRLIATGV ALQFTFAALV LYFAPARIVI
EWIGSRFVDL LGFTNAGVEM LFGSLADKSK HGVLFAIQVL PSIIFFSAFS SLLYYLGILQ
KIVFVFAWVM SKTMRLSGAE TLSASANIFL GQTEAPFLIK PYLPTMTRSE MLTIMTGGMA
TIAGAVMIAY IAFLGGDDPQ QQVLFATHLI TASVINAPAG LMLSKILLPQ TEPVSTDLNV
SKERIGSNLV DAVCVGTTDG LKLAVNVGAM LIAFTALIAM LNALLGWFGS PHDLVIGGAT
LVHYPGLNAW IREVTDGAFQ SFSLELLFGL VYAPIAWLLG IDLGHLLQSG ALLGTRTVLN
EFISFSQLAG LKSSGALTDA RTIIILTYAM CGFANIVSIG IQIGGIGALA PNQRSNLAQL
GVKAMIGGTL ACYLSACVAG ILT
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