| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4002 |
|---|
| Symbol | |
|---|
| ID | 6205363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5194496 |
|---|
| End bp | 5195326 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641693670 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001820876 |
|---|
| Protein GI | 182415810 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.268063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGATCG AGGAATATCG CCGGATGGCT GCGGTGGAAG ATGCGATGTG GTATTACCGC
GCGCTGCACC AGCATCTCGA GCGGGAGCTG ACGGCGGGGC TGGGCGAGGG TGGCCGGCGG
TGGCGGCGGG GAACGCCGTC CACGGGCAAG ACGCCCGCGC CACCTCCGAG GGCTGAAAAT
CCGCCCGGTC AGGCTGACCG TGCGATGTGG CAGATTCTCG ATGCGGGGTG CGGCACGGGC
GGGCTGATCC GGCGGCTGGA ACCGGTGCAT CCTGAGTGGC GCTGGACGGG CGTCGACGTC
GAGCCCCTGG CGTGCGAACT GGCGCGCGGC CGCGTGGCCC GGAGCGAAAT CGTGGAGGCG
TCGGTCACGG CGCTGCCGTT TGGCGATGCG AGTTTCGACG CCGTCGTTTC GGCCGACGTG
CTTTATCACC TCGACGACGA CGCGCTGGCC CTGCGCGAGT ACGCCCGCGT GCTGCGACCC
GGCGGCCGGA TAGTCATCAA CGTGCCGGCG CACCGCTGGC TGTGGTCCTA TCACGACGTG
GCGGTGCATG GTCGGCGACG GTATGTGCGG AAGGAACTGC GCGCGCGACT GGAGGCGGCG
GGGCTGCAGG TGAACCGGCT CACGCACTGG AACCTGCTGC CGCTGCCGCT GGTGATTGTG
CGGCGCAAGA TGCTGCCGGC ACCGCGAAGC GGAAGCGACG TGCGGCTCTA CCCACAGCCG
GTCGAGGCAA TCTTCAACGG ACTGATGGCC GTCGAGCGCG GAGGGTTGCG CACGTTGCGC
AGCTTCCCGG TGGGAACCTC GATCCTGGCG GTCGCAACGA AAGCCGATTG A
|
|---|
| Protein sequence | MEIEEYRRMA AVEDAMWYYR ALHQHLEREL TAGLGEGGRR WRRGTPSTGK TPAPPPRAEN
PPGQADRAMW QILDAGCGTG GLIRRLEPVH PEWRWTGVDV EPLACELARG RVARSEIVEA
SVTALPFGDA SFDAVVSADV LYHLDDDALA LREYARVLRP GGRIVINVPA HRWLWSYHDV
AVHGRRRYVR KELRARLEAA GLQVNRLTHW NLLPLPLVIV RRKMLPAPRS GSDVRLYPQP
VEAIFNGLMA VERGGLRTLR SFPVGTSILA VATKAD
|
|---|
| |