Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3996 |
Symbol | |
ID | 6205418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5187049 |
End bp | 5187975 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693664 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001820870 |
Protein GI | 182415804 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.206121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGC TCCCACTTCA ACTTTCCACG TCAACGGATG GTGCCGCGGC ACCATCACGC CGCGGCATCA TCCTCGCCGG CGGTTCCGGC ACGCGGCTCT ACCCTCTGAC CGTCGCTGTC TCGAAACAGC TGATGCCGGT CTACGACAAG CCGATGATCT ACTATCCGCT GTCGGTGCTC ATGCTCGCCG GCATTCGCGA AATTCTGATC ATCTCGACGC CGCTCGATCT GCCGCTTTTC CGGCGGCTCC TCGGCACGGG TGAGAACATC GGGGTGCGTT TCACCTACGC CGAACAGCCC CGGCCCGAGG GTCTCGCGCA GGCGTTCCAC ATCGCCGGCG ACGTTGGCTT CCTCAACGAC GAACCCGCGG CGCTGGTGCT CGGCGACAAC CTTTTCTACG GCCACAATCT CGCTGCCTCG TTGCGCGAAG TCGCCGCCCG CACGGACGGC GCCACCATCT TCGGCTATCA CGTCGCCAAT CCCGCCGCCT ACGGTGTCGT CGAGTTCGCG CCCGATGGCC GCGTGCTGTC ACTCGAGGAG AAGCCTCGCC AACCCAAGTC CAACTACGCC GTACCCGGGC TCTACTTCTA CGATCGCGAG GTCGTCCGGC TCGCGCGCAC GCTCAAGCCG TCCGCCCGCG GCGAGATCGA GATCACGGAT CTCAACCGCC GCTATCTCGA GGCCGGCAGG CTCAAGGTGG AATTGCTCGG CCGCGGCACC GCCTGGCTCG ATACGGGCAC GCACGACTCG TTGATGGACG CCGCGCAGTT CGTCCAAGTG CTCGAAAATC GCACAGGGCT GAAAATCGCC TGCGTCGAGG AAATCGCGTT CGAAGCCGGC TGGATCGATC GCGCGTGCCT CGAGGCCAAC GTGCAGCGGC TCGGCAAATC GTCCTACGGC GAGTATCTCC GCCGGCGGCT GAGCTGA
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Protein sequence | MPSLPLQLST STDGAAAPSR RGIILAGGSG TRLYPLTVAV SKQLMPVYDK PMIYYPLSVL MLAGIREILI ISTPLDLPLF RRLLGTGENI GVRFTYAEQP RPEGLAQAFH IAGDVGFLND EPAALVLGDN LFYGHNLAAS LREVAARTDG ATIFGYHVAN PAAYGVVEFA PDGRVLSLEE KPRQPKSNYA VPGLYFYDRE VVRLARTLKP SARGEIEITD LNRRYLEAGR LKVELLGRGT AWLDTGTHDS LMDAAQFVQV LENRTGLKIA CVEEIAFEAG WIDRACLEAN VQRLGKSSYG EYLRRRLS
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