| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3971 |
|---|
| Symbol | |
|---|
| ID | 6205609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5157053 |
|---|
| End bp | 5157580 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641693639 |
|---|
| Product | cytidyltransferase-like protein |
|---|
| Protein accession | YP_001820845 |
|---|
| Protein GI | 182415779 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT TGGAGAGTCT TCTTTTGCCT ATTCCCAAGT TGCGGAATCT CGCAGAAGCC
GCGCGCGTGC GAGATGCGCT GGGGCGTGGC GCCCAGAAGG TCGTTCTGAC CAACGGATGC
TTCGATCTTC TTCATGCAGG CCACATCTAC TTCCTGCAGC ACGCACGCCG GGAAGGAGAC
GCGCTTTTCG TCGCACTCAA CAGCGACGCC AGTGTTCGCG CGCTCAAGGG TCCCACTCGC
CCCATCCAGC CCGCGATCGA GCGCGCTTAC GCCCTCGCCG CGCTCGAGTG CGTGCACACG
ATCGTGCTGT TCGAGCAGCC GCGGCTGGTC ACCGAGATTC GTGCCCTGCG TCCGGACATC
TACGTCAAAG CGGGAGATTA TTCCCTCAAC TCACTCGACC GTTCCGAACG TGAAGCGCTG
CGCGAGGTCG GCGCGGAGAT CCGGTTTTTG CCCTTCTTGC CCGATCTGAG CACCACCGCG
TTGCTCCAGC GGATCGTTGC AGCCAACGCG TCGGCCCCGC CACGATGA
|
|---|
| Protein sequence | MTPLESLLLP IPKLRNLAEA ARVRDALGRG AQKVVLTNGC FDLLHAGHIY FLQHARREGD
ALFVALNSDA SVRALKGPTR PIQPAIERAY ALAALECVHT IVLFEQPRLV TEIRALRPDI
YVKAGDYSLN SLDRSEREAL REVGAEIRFL PFLPDLSTTA LLQRIVAANA SAPPR
|
|---|
| |