| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3877 |
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| Symbol | |
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| ID | 6205710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5034268 |
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| End bp | 5036238 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693545 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_001820751 |
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| Protein GI | 182415685 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.725611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0235537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT TTTTCACGTC GATGCTTGGC GCGTTGGTGG CCCTGATCGT CTTCACGCTG
GGCGGCGGAC TGTTGATGCT CGGCCTCATT GGCGCGATGG CCGCGCTGGG TGAGAAACAG
GTCGCGGTGG AGAAGGGCTC GTACCTGGTG TTCGATCTCT CGTCGGCGAT CACGGACGCA
CCGCCGGTGA TCGACTTTCG CGCGCTGGGA TCAGACCACA AACCGACGCT GCAGCTGCGC
ACCGTCACGC GCACGCTGCG CGCGGCGGCG AAGGACGACC GGATCGCGGG CATCTTCATT
TTCGGCGATG TGCCGGCGGG CGGGCCCGGT TATGGCGCGC TTAAGGAGGT GCGCGCGGCG
CTCAACCAGT TCAAGGCGTC GGGCAAGCCG GTGAAGGCGT ATCTCACGTA TGCGACCACG
AAGAACTACT ATCTGGCTTC GGTGGCCGAC GAGCTGACGA TCGATCCCTA CGGCACGATC
ATCATGCCGG GACTCGCGAG CCAGCCGATG TTCCTCGCGG GCGCGTTCGA GAAATACGGC
ATCGGCGTGC AGGTCACGCG CGTGGGCAAA TACAAATCGG CGGTCGAGCC GTTCACGCGC
ACGGACATGA GCCCGGAAAA TCGGGCGCAG ATCCAGAAGC TGCTCGACGA TGTCTGGGCC
GGATTGCTGC GCGACATGGC GGGCTCGCGA AAACTGAAGT CGAATGCGAT TCAAGCGACG
GTCGATGCCG AAGGGTTGAT CCGCGCCGAC GCCGCCAAGG CCGCGAACCT GGTCGATCGC
ATAGCCTATC GCGACGAGAT CATCGGCGAG CTGAAGCGCA TCACGGGCCG GGACAATTCC
AAGGAATCGT TCAAGCAGAT CGGACTCGTG GACTATTCGA AAGTGGCCAA GGACCAGCCG
CCGCCGTTGC GAACGATGAA GCCGGCGGAT CGGGTCGAGG AGCTGGCCAA AACGGAGGGC
GACGCCTCCG CGAAACCGGC GGTCGCCACC AAGACGCCGG ACGCCGCGGC GCAGAAAACA
AGCCCGGCGG CGAAGAAAGC CGAAGCACCC GCGGTGGCGG TGAAAGACGA CGATGACCAG
GTGCGTCGAT CCAGCCGCTC GGGGCGCGTC GCGGTGGTTT ACGCGGAGGG CGACATCGTC
GACGGCGAGG GCAACGAGCA AGGCGAGATC GGCGGCACGC GTTTCAGTCG CGAATTGCGC
CGGCTGCGGC AGGACGACAG CGTGAAGGCG ATCGTGCTGC GCGTGAACAG CCCGGGTGGC
AGCGCGTCGG CGTCGGAGAC AATTCAGCGC GAGATCCGGC TGGCGCGCGA AGTGAAGCCA
GTGATCGTCT CGATGGGGTC CTACGCGGCG TCCGGCGGGT ATTGGATTTC CGCGTATGGC
GACCGAATTT TCGCCGAACC CACGACCGTG ACCGGATCGA TCGGCGTGTT CGGGATCATG
TTCGATGTGC AGAAACTCTT CAATGGCTGG GGGCTGACCT TCGACAGCGT CAAAACCGGC
CGGTTTGCCG ACACGCTGAC GATCGCGCGG CCGAAGACGC CGGAGGAGAT GGCGCTGTTC
CAGCGCTCGG TGGACTGGAT CTACGACCAG TTCGTCTCGA AGGTGGTCGA GGGCCGGCAC
CTCGCGCGCG AGCACGTCGA GGAGATCGCG CAAGGGCGGG TGTGGTCCGG CGTCGAGGCG
AAGAAGCTCG GACTCGTGGA CGAACTCGGC GGCTTGGACG CGGCGATTCG TTACGCCGCG
GGCCGCGCGG GGCTCGGCAG CGATTACCGG TTGGTGGAAT ATCCGCGGAA GAAGGAGTTC
GCCGAGGCGC TGCAGGAGGT GTTCGAGAAG ATGGCGCCGA ACAGCGCCCG CGCGTCGGGC
GTGGTGGGCC AGGTGGTGCA GCGGGTGGAG AGCGAGCTGC GCGTGCTGGG GACGTTCAAC
GATCCGCAGG GAGTGTACGC ACGCTTGCCG GAAAACTTGA TGATTCAGTA G
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| Protein sequence | MKNFFTSMLG ALVALIVFTL GGGLLMLGLI GAMAALGEKQ VAVEKGSYLV FDLSSAITDA
PPVIDFRALG SDHKPTLQLR TVTRTLRAAA KDDRIAGIFI FGDVPAGGPG YGALKEVRAA
LNQFKASGKP VKAYLTYATT KNYYLASVAD ELTIDPYGTI IMPGLASQPM FLAGAFEKYG
IGVQVTRVGK YKSAVEPFTR TDMSPENRAQ IQKLLDDVWA GLLRDMAGSR KLKSNAIQAT
VDAEGLIRAD AAKAANLVDR IAYRDEIIGE LKRITGRDNS KESFKQIGLV DYSKVAKDQP
PPLRTMKPAD RVEELAKTEG DASAKPAVAT KTPDAAAQKT SPAAKKAEAP AVAVKDDDDQ
VRRSSRSGRV AVVYAEGDIV DGEGNEQGEI GGTRFSRELR RLRQDDSVKA IVLRVNSPGG
SASASETIQR EIRLAREVKP VIVSMGSYAA SGGYWISAYG DRIFAEPTTV TGSIGVFGIM
FDVQKLFNGW GLTFDSVKTG RFADTLTIAR PKTPEEMALF QRSVDWIYDQ FVSKVVEGRH
LAREHVEEIA QGRVWSGVEA KKLGLVDELG GLDAAIRYAA GRAGLGSDYR LVEYPRKKEF
AEALQEVFEK MAPNSARASG VVGQVVQRVE SELRVLGTFN DPQGVYARLP ENLMIQ
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