| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3875 |
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| Symbol | |
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| ID | 6208176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5032453 |
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| End bp | 5033607 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693543 |
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| Product | dihydrouridine synthase DuS |
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| Protein accession | YP_001820749 |
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| Protein GI | 182415683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0954175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0179624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TCCCCGCACC GCTTCCGCCA CCCGTCGTTG CTGGACTCCC GCTGACCGCG
CTCGCGCCGA TGCAGGACGT CACCGATCTG ACGTTCATGC GGGTGATCGC GCATTACGGC
GCGCCCGACT ATTTTTTCAC CGAGTTCTTC CGCGTGCACT CCCAGTCGCG GCTGGAGAAG
CACATCGTCC GGTGCCTCGA TGACAACACC ACCGGCCGGC CAATTTTTGC CCAGGTAATC
GGCGAGGACC TCGAGCAACT GGTCCGCACA GCGCGTGAGC TTCAGCAACA CCCGATCGCG
GGGATCGATC TGAACCTCGG CTGTCCTGCA CCCAAGGTCT ACAAGAAGAA CGTCGGTGGC
GGGCTGCTGC GCGATCTCGC TCATGTGGAC CGGATCCTCG GCGCGCTCCG CGCCGCCACG
CCCGGCGGCC TGTTTACGGT GAAGATGCGG ATCGGGTTCG ACGACACGAC GCCGTTCGAA
CCGATGCTCG ACCTGGTGAA TGCCCACCGC GTCGACCTGC TCAGTGTGCA CGGGCGAACC
GTGAAGGAGA TGTATCGCAG CCGCGTGCAC TACGATTTCA TCGCGCGCGC GGTGCAGCGC
GTGCGCTGTC CTGTGCTCGC GAACGGCAAC GTGACGTCCG CGCCCCGCGC CGTCGCGATC
CTCCGCGAAA CCGGCGCCGC GGGTGTGATG ATTGGCCGCC ACGCCATCCG CAATCCGTGG
ATCTTTCGCC AGTGCCGCGA GCTGTTTCAC CCGCCACCGG CGCTTCAGTC GACGACAGAA
CCAAGCAGCC TCCCCGCGAC GGCAGGCGCC ACCTCGCCGG CCTGCTTCCG TCCCACGTTC
GCCGATGTCC GCGACTACAT CGCACATCTT TACCAGGCGA CCCAGACGCC GGGGATCCCG
GAGCGAATCC ACGTGAGCAA GATGAAGAAG TATCTCAACT TCGTCGGCCA GGCGGTGGAC
CCCACGGGCG CCTTCCTGCG CGAGATGCGC CGCGCCGAAT CCGAAGCCGA ACTCTTCCGC
GTCTGCGATC GACATCTGCT GCCCGAGCCC GCGCACCTGA TCGCGGACGA GCCTTACGAG
GGTGTCATCG CCCGGCCGAA TTGCGAAACG CCTCACCCCG CCGACCGCGG TTCACCTGAG
ACGATCTCGG CGTAA
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| Protein sequence | MTDLPAPLPP PVVAGLPLTA LAPMQDVTDL TFMRVIAHYG APDYFFTEFF RVHSQSRLEK
HIVRCLDDNT TGRPIFAQVI GEDLEQLVRT ARELQQHPIA GIDLNLGCPA PKVYKKNVGG
GLLRDLAHVD RILGALRAAT PGGLFTVKMR IGFDDTTPFE PMLDLVNAHR VDLLSVHGRT
VKEMYRSRVH YDFIARAVQR VRCPVLANGN VTSAPRAVAI LRETGAAGVM IGRHAIRNPW
IFRQCRELFH PPPALQSTTE PSSLPATAGA TSPACFRPTF ADVRDYIAHL YQATQTPGIP
ERIHVSKMKK YLNFVGQAVD PTGAFLREMR RAESEAELFR VCDRHLLPEP AHLIADEPYE
GVIARPNCET PHPADRGSPE TISA
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