Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3873 |
Symbol | |
ID | 6205734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5030774 |
End bp | 5031619 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693541 |
Product | hypothetical protein |
Protein accession | YP_001820747 |
Protein GI | 182415681 |
COG category | [S] Function unknown |
COG ID | [COG3494] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.429993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0170553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCTCT CCGCGTTCCT GCCTCCGGAT TTCGACCCGC GCCGTCCGCT CGCGCTGATC GCCGGACAAG GTCTCTATCC GCAACTCGTC GCCGCCGCGG CGCGCCACGC CGGCGTCCCG CTGAAGCTGA TCGCCTTCGA TGAGGAAACG CGTCCCGAGC TGATCGCGTC GTTTGCCGAC GCGGACCGCC GCACCTTGCT GGTCGGGCAA CTCGGCAAGA TGCTGAAAAT GCTCCGCGAG TTCGATGCCG GCTACGCGCT GATGGCCGGT CAGATTTCCC CGCGGCGGTT GTTTCGCGGC TTGCATCCCG ACCTCAAGGC GGTGCGCCTG CTCGCTTCGT TGAAACGACG CAACGCCGAG ACGATCTTCG GCGCCATCGC CGCGGAAATC GAAGGACTCG GGATCACGTT GCTCGACGCC CGCTCGTTCT TGGACGACCA GCTCGCCACC GCCGGCTGCA TGACCGGCCG ATCGTTTCCG ATCGATCGCG ACTACGTGGA GCATGGCGTC CACATCGCGC GCGAATGCGC CCGGCTCGAC ATCGGCCAGG GCTGTGTCGT TCGGAAAGGC ACCGTGCTCG CGGTCGAAGC CTACGAGGGC ACCGACGAGA TGCTGCGGCG TGCCGGGGCA TTCAAGACCG ACGCCGCGCT GTTCGTGAAG ACGGTCAAGG CCGGCCAGGA TTATCGCTTC GACGTCCCTT GCTTCGGCCA GCGCACGCTT GAGACCATGC GCGAGGCCGG CATCGCTGCC GCGGCGCTCG AGGCCGGCCG AGTGATCATG CTCGATCGGC CCGCGGTGCT CGCGCAGGCG CGCACCTGGG GGATCAATCT GCTCGGCTTC GAGTAA
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Protein sequence | MPLSAFLPPD FDPRRPLALI AGQGLYPQLV AAAARHAGVP LKLIAFDEET RPELIASFAD ADRRTLLVGQ LGKMLKMLRE FDAGYALMAG QISPRRLFRG LHPDLKAVRL LASLKRRNAE TIFGAIAAEI EGLGITLLDA RSFLDDQLAT AGCMTGRSFP IDRDYVEHGV HIARECARLD IGQGCVVRKG TVLAVEAYEG TDEMLRRAGA FKTDAALFVK TVKAGQDYRF DVPCFGQRTL ETMREAGIAA AALEAGRVIM LDRPAVLAQA RTWGINLLGF E
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