| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3871 |
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| Symbol | |
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| ID | 6206564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5027727 |
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| End bp | 5028371 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693539 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001820745 |
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| Protein GI | 182415679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.631942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0416181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA CCTTTACCCA CCTCGCCCGC CTGCTGCTCG CCGGCCTGCT CGTCGTTCTA
ACAGCCGGCG CCGCCGCTGC CGCCGCCGAC ACACCGGCCG CGGGGACGAC CGACAAACCC
GGCTTCGTTT ACCGGCTCAC CATCACCGAT CGGATTCGGA TTTCCGTTTT TCAGGAGGAA
GATCTCGCCG ACATCGTGCG GATCGATGCG CAGGGCAACG TGAAGTTGAA GCTCGCGGGC
GATGTGAAGG TCGCCGGCCT CACGGCCAGT GAGGCGCAGC GCGCCATTGA GCAGGCCTAC
CGCGACGGCC GTTATCTCCG CAATCCGCAG GTGACGATCG CCATCGAGGA TTACGCGCCG
CGCGAGGTCT CGATCCAGGG ACAGGTCAAG GCCCCGGGCC GTTTCCTGCT GCCGATCGAA
TCCACCTTCT CCGTCGTCGA GTTGGTCACC AAGGCCGGCG GACTCACCGA TATCGCCAAG
GGCAGCGCCG TCGTCGTGAC GCGCATCACG CCCGATGGCC GGAAACAGAC CTTCACCGTC
AACGTCGACA GCGTCATTCG CGGCAAGAAA GGCAACGATA CCGACGCGTC CGATCTCCTG
CTGGAGCCGG GCGACATCGT CTACGTGCCC GAGCGCATCA TCTAA
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| Protein sequence | MPPTFTHLAR LLLAGLLVVL TAGAAAAAAD TPAAGTTDKP GFVYRLTITD RIRISVFQEE
DLADIVRIDA QGNVKLKLAG DVKVAGLTAS EAQRAIEQAY RDGRYLRNPQ VTIAIEDYAP
REVSIQGQVK APGRFLLPIE STFSVVELVT KAGGLTDIAK GSAVVVTRIT PDGRKQTFTV
NVDSVIRGKK GNDTDASDLL LEPGDIVYVP ERII
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