| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3863 |
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| Symbol | mdoD |
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| ID | 6204540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5015312 |
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| End bp | 5016871 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693531 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001820737 |
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| Protein GI | 182415671 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0232574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC ACACTCTTTC GGCCGCGCTG GTGACGAATC GTGCCCCGCT CAACTTTCGC
CGCGCCGGCG CGTGGTTGCT CGGCGTGCTG CTGCTGGGCG CGGCGTGGAA CCGCGCGCCG
GCGGCGGACG AACCGTTCGA TTTCGAGACC CTTCGCTACC GGGCGAGGAT GCTGGCCGCG
AAACCCTACG TGGCGCCCGC GAGCCGTGTG CCCGAGTGGC TGCTGAAGCT GAGCTACGAC
GAGCACCGGC GCATCCGGTT TGATCCGGCT CATTCCTGGT GGCGCCGGGA GCGGCTGCCG
TTCGAGCTGC AGTTCTTCCA CCCGGGTTTC ATCATCAAGA ACACCGTGCA GATCTCGGAG
ATCCGCCGCG GCGAGCCGAC GCTGATCAAG TTCGACCCCG AGCTGTTCAT CTATGACCGG
CTGGAGCGCG GCGAAATCCC GGGCACGATG GGCTTCGCAG GCTTCAAGAT TCTTTATCCG
ATGAACAAGC CGGGCGACGA ACTCGGCGCG TTCCAAGGCG CGAGCTATTT CCGGCTGCTG
TGCCAGAAAG CGATCTACGG ACTCTCCGCG CGCGGGCTGG CGCTGAACAC CGCGGAGCCG
GGCGGCGAAG AGTTTCCGAC GTTCACCGAC TTCTGGATCG AGCGGCCGGA GCCGCACGCG
AAGAGCATCA CGCTCTACGC GCTGCTCGAC AGCCCGAGTG TCGCCGGCGC CTACCGGTTC
GTGATCACGC CGGGCGCGGA TACCGTGGCG CACGTAAAGG CGGCGTTGTT TTTCCGCAAA
CAGGTGACGA CCGTTGGGCT CGCGCCACTC ACCAGCATGT TCTGGCACGG CGAGAACACG
AACACCCAGA CGGATGATTT CCGCCCGGAG GTGCACGACT CCGACGGGCT GATGCTGTTC
ACCGGCGCGG GCGAATGGCT CTGGCGGCCG GTGACGAATC CGACCGCGGT GCGCGTGGCG
GCGTTCAGCG ACGAGCGTCC GCGCGGGTTC GGGCTGCTGC AGCGCGATCG GAATTTCGAA
AACTACCAGG ACCTCGAGGC GGCGTATCAC AGCCGGCCGA GCGCATGGGT GGAGCCGATC
GGCAATTGGG GCGCAGGCTC CGTGCGGTTG GTGGAAATTC CCACGCCCGA CGAGACGAAC
GACAACATCG TCGCGTTCTG GACGCCGCGG GACGTGCCGC CGGTCGGCGA GCCGTTGGTG
TATGAATACC GGCTGCACTG GTTCACCGAG CAGATTCACC CGCCCGCCGG CTACACGGTC
TCGACACGGC ACGGCCGGAC GAAGACGCAC GAGCCGGAAC TCGAACGGTT CCATCTCGAT
TTCGCCGGAC CGTATTTGAA CAACCAGAGC GCGGATCCGG CGATCGAACC GGTCGTGACG
GTCGGCGACG GCGCCAAGCT CGCGCATGCG ACCGTGCAGA AGAACCCGTT CAACGGCACC
TGGCGCGTGG CGTTTGCGAT CCGGCCGGAC GGTTCGGGCC GGCCGGTCGA GTTGCGGTGT
TTTCTGCGCA AGTCGCCGCA CGTGCTGACG GAAACCTGGA GTTATCTGTG GCAACCCTGA
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| Protein sequence | MNTHTLSAAL VTNRAPLNFR RAGAWLLGVL LLGAAWNRAP AADEPFDFET LRYRARMLAA
KPYVAPASRV PEWLLKLSYD EHRRIRFDPA HSWWRRERLP FELQFFHPGF IIKNTVQISE
IRRGEPTLIK FDPELFIYDR LERGEIPGTM GFAGFKILYP MNKPGDELGA FQGASYFRLL
CQKAIYGLSA RGLALNTAEP GGEEFPTFTD FWIERPEPHA KSITLYALLD SPSVAGAYRF
VITPGADTVA HVKAALFFRK QVTTVGLAPL TSMFWHGENT NTQTDDFRPE VHDSDGLMLF
TGAGEWLWRP VTNPTAVRVA AFSDERPRGF GLLQRDRNFE NYQDLEAAYH SRPSAWVEPI
GNWGAGSVRL VEIPTPDETN DNIVAFWTPR DVPPVGEPLV YEYRLHWFTE QIHPPAGYTV
STRHGRTKTH EPELERFHLD FAGPYLNNQS ADPAIEPVVT VGDGAKLAHA TVQKNPFNGT
WRVAFAIRPD GSGRPVELRC FLRKSPHVLT ETWSYLWQP
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