| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3823 |
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| Symbol | |
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| ID | 6205598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4964737 |
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| End bp | 4968504 |
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| Gene Length | 3768 bp |
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| Protein Length | 1255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693491 |
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| Product | carbohydrate-binding CenC domain-containing protein |
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| Protein accession | YP_001820698 |
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| Protein GI | 182415632 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0816549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.385041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA CCCGACTGCT TTCGATCTCG CTTCTCCTCG CCCTCACCTG CTCCGTCGCC
AGTGCCGCGC TCGAGTCGTT CACGCTCCCT TGGAACGACG CGACCCCCGG CATCACCAAC
CTGCAAACGT GGCAACCGAC GCCCGCGGGT GACGCCGGAT GGGTATCCGT GACAGCCGGC
GGTCACTACG TCGTCGGCGG CGAACGGATT CGGTTTCTCG GCGTCAACGT GGCCGATCTC
AGTTGTTTTC CCACGCATGC GCAGGCCGAG GGGCACGCGG CGCGACTCGC CCGGTTCGGG
TTCAACGCCG TGCGCTTTCA TCACATGGAA GCGCAGTGGG CGAAGGACAG CGTCATCATC
GATTACTCGC TCGGGAACTC GCGCACCCTT TCCGCCGACC GGCTGGAGCG GTTGCACTAT
TTCGTGGCGC AGCTCGCCGC TCGTGGGATC TACAGCAACA TCAATCTCCT CGTCTCGCGC
GAATTCCAGG CCGGGGATGG GCTTGGCCCC GAGATCACGC AACTCGAGTG GAAGGATCAG
CACATTCTCG GGTTCTTCAT GGACGAGGCG CTGCAGCTGC ACAAAGAGCA CGCGACCAAG
CTCCTGTCCG CCCCGAATCC ATATCGCGGC GGCCGCTCGC TCGCCGAGGA CCCGGCGGTG
TCGTTCGTCG AGATCATGAA CGAGAACGGG CTCCTGCAGA AGTGGTATGA GAACGTCCTC
GACACCCTGC CGACGCCCTA CCGCAGCGCG CTGCAGGCGA AGTGGAACGC GTGGTTGAAA
ACCCGCTACG CCACCACGGC CGAGCTGCTC GCCAGCTGGG GCACCATCGA CCAGCCGCTC
GGCGCGAACA TGCTCGCCAA CGGCGACTTC GCGGCCGGCA CCGGCTCGTG GAATTTCGAA
CAACACAACG GTGCCGTCGC CACGCGCATC GCCGGCACCG AATTCAATGG CCAGCCTTCG
CTCCGGATCG CGGTCACCAC TCCCGGCTCC GCCGGTTGGC ATATTCAACT CAACCAAGCG
GGCCTCGCGT TCACCTCCGG CAAGACGTAT ACGGTGAGCT TCTCGGCCAA AGCCGCTGCC
GCCACCCCGC TCTCCTGCAG CCTCACCCGC ACCGGCCCGA GCGACTACTC CGGCGTCGGT
TCCTCGATCA GCACCACGCT GGGCACCAGC TGGCAGCGCT ATACGTTCAC TTTCCAGGCG
GCCAACGACG AGCCGAGCGT GCGGCTCAAT TTCAATGGCT TCGGCGATCG GCTCTGCACG
GTTTACCTCG CTGATGTCCG CTTCTCGGAA GGCGGCAAGA TCGGCGGACT CGCCGACGGC
GTGACGCTCG AGGCCGGCAA CATTCCGAAT GTTCTCCACA ACGCCGCCGC CGGCAGCGCC
ACTGCCGGCC AGACCCGCGA TTGGATCACC TACGTGTTCG CCGCCGAAAA AGTTTATTGG
GACGCGATGA AGGCCCACAT CAAAGACACG CTCGGCTACC GCGGCATCGT CTGGGGCACG
ATCATCTCCA ACAGCCCGCC CAACGCCCAG TCCAGCCTCG ATGCGATGGA CTCGCACGCC
TACTGGCAGC ACCCCGTGTG GCCCGCCGGC AAAGATTGGG ATCCGGTCGA CTGGACGATC
AGCAATGTCT CGATGGTCAA CTCGCCGTCG TCGAACACGC TCACCGGCAT CGCGCGGCAG
CGCGTCGAAG GCCGGCCGCA CAACGTCACC GAGTATCAGC ACGCTTCGCC CAACACCTAC
GCGAGCGAAA CGCCCCTGCT CGCGGCCGCC TTTGGCGCGC TGCAGGATTG GGACAGCCTT
TGGATGTTTG CCTACGACAC CAACACGGAC GCCGCGGTCA GCGGCTTCTT CGATCACGGC
GGACACTCCG GCAAGATGGT CAACCAACTG CTCGCGGCCA CGCTCTTCCG CCGCGGCGAC
GTCGCGCCCG CGAACCTTTC CTACACGCTA CCTTTCACGC CCGCCCAGGA AGTCGAAGCC
GCACGCGCTT CCGGCGCCGC GTGGTCGATC GCCGACGGCT CGAAGATCGG GATGCCGGCG
TTGATGACTT CTCAGAGTCG CGTCGCACTC AGCATCGGCG CCACGGCGAC CGGTCTCGCC
TCACCGCCCG CGACGCCCAC GGGATCCGTC TTCACCGCGG ACACCGGCGA ACTGCGCTGG
GACACTTCCG TCGCGAACAA AGGCGTCGTC ACCGTCAACA CGCCGCGGAC GAAGGCGGTG
ATCGGGTTCA CCGCAGGTCG CAGCTTCGAC CTGGGCGGTG TCGTTATTGC ACCGGGCACC
ACGCGACAGG ACTGGAGCAC GATTGGCCTC AGTCTGCTCG AAGGCTACCA ATTTGATCAG
GCCGGCGCCG CGCGCGCCGT GCTCGTGGCC ACGGGCGACC AGGAGAACAC CGGACAGACG
TGGAATACGG CCAAGAATTC CATCGGCAAC CGTTGGGGAA CGAGTCCGGT CCTCGTCGAA
GTCGTTCCCG CCACCATCAC GCTGCCGGTC GCCGCCACGC GCGTGAGCGT GTGGTCGCTC
GACGAGACCG GCCAGCGCAA GGTGGCCGTG AGCGTTCGCG ACGCCGCCGG CCGCGCGCAG
TTCGACCTCG GTCGAAGCGG CACCACGCTG TGGTATGAGA TCGCAATCGA AGCCGGTCCT
GTAACTGCTG CCGCGATCGC CAGCCAACCA GCGCCGGCGC GCAGCTCAAT CCTCGGCGGC
AGTGTCACGC TGGCGTTGTC CGCGAACGGT TCACCGGCGC CCGCCGTGCA GTGGACGCGC
AACGGCAGCG ACGTGACGCG GCTCGCCGCA CCGGTGGTGA CACTGGAAAA CCTGCAGCCT
GCGGACGCCG GCATTTACCG CGCACGCGTC AGCAACGCGT CGGGCTCGGT GCTGAGCGAG
CCCATGATCC TGGGCCTGAC CTCCAGCAGC AAAGTGGTCG GCGCGGGGCA TGAAGTCGGC
TCCAACATCT ACGTGGCGAG CAACGGCAAC ACGTTTGACC AAGTGCTGCT CGAGGGCGCT
GCGGCCGCAA TCACAGCTGA CCACGCGCTG AATCAGATCA CGCGACTCTC CTACATCGAT
TTGGACAACG ACATCGTGCA GGTGGAGATG AGCGGTCCGG GCACCTTGTC GCTCGTGCTC
GACAGCGCGA CCGGCCCGGC GGCGCCGGTG AATTACAACC AATCAAACGT GGGCTATATG
AAAGGGCACG CCGGCATTGT CATCACGGGG GCTGATGAAC GCACGAACGT CTCGGCGTTC
ACCGTGGGGC GGTTCACCGC GTTCGATCCA ACAGGCACCT TCGACGTGAC GAAGCCTGTC
ACCGATCTGA ATCATCCCTC GAAGAACGGC AGCCCGCTTT TCGCCGGCCA GGCGGACACC
GCGTATGACG GGATTGCCGA CCTCGCCTTC ATCGCGATTG CCAGCACCGA CGGCAGGTTC
GGCGGCGTGC GCGCGGCGAA CGCAAACTTC TTCGCGACCA AAGGACTCAC CGGCGTTTAC
GCACCCGGTG TCACGTTCTC CGGTCCCGTG TATGTCGGCG ACATCATCGC CAGCGATGAC
TCAACGCCGG TGCTCCGACT CGGTGCCGCC AGCAACACAC GGATCACCGG CGGCGATTTG
CTGCAGGCGA ACGGCGCGCC CGTACAGGTC AGCGGAATCA CACAACTGGT CTTTGCCGAC
GGCAGCGACT CGCACGGCCG ACTGCTGCCG GCGCAGCGGA ATCAAGCGGT CCTGCAGGAA
AACGGCGTCG ATGTGACGGC GACAATCGTA GTGAATCCGA CGCCATAG
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| Protein sequence | MLRTRLLSIS LLLALTCSVA SAALESFTLP WNDATPGITN LQTWQPTPAG DAGWVSVTAG
GHYVVGGERI RFLGVNVADL SCFPTHAQAE GHAARLARFG FNAVRFHHME AQWAKDSVII
DYSLGNSRTL SADRLERLHY FVAQLAARGI YSNINLLVSR EFQAGDGLGP EITQLEWKDQ
HILGFFMDEA LQLHKEHATK LLSAPNPYRG GRSLAEDPAV SFVEIMNENG LLQKWYENVL
DTLPTPYRSA LQAKWNAWLK TRYATTAELL ASWGTIDQPL GANMLANGDF AAGTGSWNFE
QHNGAVATRI AGTEFNGQPS LRIAVTTPGS AGWHIQLNQA GLAFTSGKTY TVSFSAKAAA
ATPLSCSLTR TGPSDYSGVG SSISTTLGTS WQRYTFTFQA ANDEPSVRLN FNGFGDRLCT
VYLADVRFSE GGKIGGLADG VTLEAGNIPN VLHNAAAGSA TAGQTRDWIT YVFAAEKVYW
DAMKAHIKDT LGYRGIVWGT IISNSPPNAQ SSLDAMDSHA YWQHPVWPAG KDWDPVDWTI
SNVSMVNSPS SNTLTGIARQ RVEGRPHNVT EYQHASPNTY ASETPLLAAA FGALQDWDSL
WMFAYDTNTD AAVSGFFDHG GHSGKMVNQL LAATLFRRGD VAPANLSYTL PFTPAQEVEA
ARASGAAWSI ADGSKIGMPA LMTSQSRVAL SIGATATGLA SPPATPTGSV FTADTGELRW
DTSVANKGVV TVNTPRTKAV IGFTAGRSFD LGGVVIAPGT TRQDWSTIGL SLLEGYQFDQ
AGAARAVLVA TGDQENTGQT WNTAKNSIGN RWGTSPVLVE VVPATITLPV AATRVSVWSL
DETGQRKVAV SVRDAAGRAQ FDLGRSGTTL WYEIAIEAGP VTAAAIASQP APARSSILGG
SVTLALSANG SPAPAVQWTR NGSDVTRLAA PVVTLENLQP ADAGIYRARV SNASGSVLSE
PMILGLTSSS KVVGAGHEVG SNIYVASNGN TFDQVLLEGA AAAITADHAL NQITRLSYID
LDNDIVQVEM SGPGTLSLVL DSATGPAAPV NYNQSNVGYM KGHAGIVITG ADERTNVSAF
TVGRFTAFDP TGTFDVTKPV TDLNHPSKNG SPLFAGQADT AYDGIADLAF IAIASTDGRF
GGVRAANANF FATKGLTGVY APGVTFSGPV YVGDIIASDD STPVLRLGAA SNTRITGGDL
LQANGAPVQV SGITQLVFAD GSDSHGRLLP AQRNQAVLQE NGVDVTATIV VNPTP
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