| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3821 |
|---|
| Symbol | |
|---|
| ID | 6204724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4962976 |
|---|
| End bp | 4963245 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641693489 |
|---|
| Product | FmdB family regulatory protein |
|---|
| Protein accession | YP_001820696 |
|---|
| Protein GI | 182415630 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.268528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.226192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCT ACGAGTATGC CTGTCAGAAG TGCGGTCACA CCTTCGAGCA GTTCCAGTCG
ATGCACGATG CGCCGCTGAA GAAATGTCCG GAATGCAAAA AGCTCGGGCT GAAGCGGCTC
ATCGGTGGCG GCGCGGGACT GATTTTCAAG GGCTCGGGTT TCTACATCAC CGACTACAAA
AAGAAGTCCG GCGGCGATAG CGGCGGCGAG AAGCCGTCCA CGCCGAAGAG CGAGAGCAAG
GCGGACGCGA AGCCGGCCGC CAACAAATAG
|
|---|
| Protein sequence | MPTYEYACQK CGHTFEQFQS MHDAPLKKCP ECKKLGLKRL IGGGAGLIFK GSGFYITDYK
KKSGGDSGGE KPSTPKSESK ADAKPAANK
|
|---|
| |