| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3811 |
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| Symbol | |
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| ID | 6205012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4950930 |
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| End bp | 4952360 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641693479 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001820686 |
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| Protein GI | 182415620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.521708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.399123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TCGCGCTGTT TTTTGCATTC ACCACGCTCG GGTTTGCGGC ACTGCCAAAG
GTCGGACCTG ACTACTACCG ACCCGACCTG CCGCCGCTGG CGAGTTATCG CGACGCTGGC
GGTTGGAAAA CCGCCGATCC GGCTGACGCG CTGCCCCGCG GTGCGTGGTG GAATTTGTTC
GGCGATCCCG TGCTCGACGG ACTCGAGACG CGCGCACTCG CCGCCAACCA GGACCTGCGT
GCCGCCGCCG CGCGCGTCGA GCAGGCCCGC GCGGCTGCCG GCATCGCGCG CGGCGACTAC
TGGCCGCAGC TCGCCGCCCA CGGCGCCGTC ATCCGCGAGC AGACCTCGCA GACGACGGAG
AATGTCTTCC CCGACCCGCG CACCACGACC TACCGCGCGC CACTTACCGC CGCGTGGGAG
CTCGACCTGT TTGGCCGCGT GCGGCGCTTG AACGAATCCG CCCGCGACGT CGCGGCGGCC
AGCGAGGCGA CGTTCGAATC CGTCCGGCTG TCGCTCACGG CCGATGTGGC GGCGAACTAC
TTCGCGCTCC GTGCTACCGA ACGGGAGCTG GTGCTGCTGG ACGATACCGT GCGCCTGCGA
CGTCGCGCGC TGGAACTCGC GACCGCGCGC GTGCGCAGCG GCACGGCGGC CGATCTGGAT
GCCGCGCGGG CCGAGACCGA ACTGGCCAGC ACCGAGGCGG AACGCGCGAC GCTGGCGAAT
CAGCGTTCCG CGTTGGCCAA CGCGCTCGCC ACGCTGGTCG GCGAGCCTGC CAGCGGTTTT
GTGCTCGCGG TCGTGGAGCA CGAGCCCGTG CTGCCGCACG TGCCGGCGGG ACTGCCGTCG
GAGTTGCTGG AGCGGCGGCC CGACATCGCG GCCGCGGAGC GTTCGCTCGC CGCGGCCAAC
GCGCGGATTG GTGTCGCCAA GGCTGCGTTC TTCCCGGCGA TTTCGCTCAC CGGCTCTGCG
GGCTATGCCA GTGCGGACAT CGATCGGTTG ACCGAGTCGG ACTCACGGAT CTGGTCGATC
GGACCGCAAC TTTACCTGCC GATTTTCCAA GGCGGCCGCA ACCGCGCCAA TCTCGCGCGC
AGCCGCGCGG CGTATGACGA AGCGGTGGCT GCGTTCCGGC AGCGTGTGCT CGTGGCGCTG
CGCGAGGTGC AGGACGCGTT GACCGCCAGC CGACTGATCG GGGAGGAGGC GGCCGCCCAG
CAGCGCGCGC TCGAATCGTC GCGCCGCGCG CAGCGGCTGG CGCAGATCCG CTACGACGCC
GGCTACGTGT CCTACCTCGA GGTCATCGAT GCGCAGCGGA CGGCGCTGGC GACGGAACGA
GCGACCGCGC GGCTCATCGG TCGCCAGCTG GCCACGCGCG TGGCGTTGAT CAAAGCGCTG
GGCGGCGGCT GGCACGCGCC GCAGCCGGGC GGCTCGCTCG CGGCGCGCTG A
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| Protein sequence | MKILALFFAF TTLGFAALPK VGPDYYRPDL PPLASYRDAG GWKTADPADA LPRGAWWNLF
GDPVLDGLET RALAANQDLR AAAARVEQAR AAAGIARGDY WPQLAAHGAV IREQTSQTTE
NVFPDPRTTT YRAPLTAAWE LDLFGRVRRL NESARDVAAA SEATFESVRL SLTADVAANY
FALRATEREL VLLDDTVRLR RRALELATAR VRSGTAADLD AARAETELAS TEAERATLAN
QRSALANALA TLVGEPASGF VLAVVEHEPV LPHVPAGLPS ELLERRPDIA AAERSLAAAN
ARIGVAKAAF FPAISLTGSA GYASADIDRL TESDSRIWSI GPQLYLPIFQ GGRNRANLAR
SRAAYDEAVA AFRQRVLVAL REVQDALTAS RLIGEEAAAQ QRALESSRRA QRLAQIRYDA
GYVSYLEVID AQRTALATER ATARLIGRQL ATRVALIKAL GGGWHAPQPG GSLAAR
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