Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3797 |
Symbol | |
ID | 6205092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4930625 |
End bp | 4931506 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693465 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001820672 |
Protein GI | 182415606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.282728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.346608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG ACGTCCGTAG CTCCGCCGCC GTCGGGCTCG AGCGCCGCCG CGCCTCGTGG CGCGCGTGGC TGCTGCTCGC GCCGATGGTG CTGTGGCTGG TGTTGTTCGT GGTGCTGCCG AGCGTCATCC TGCTGGTCTA CAGCTTTTGC GAGCGGGACG AACTCGGCCG CGTGGTTTAC ACGTTCACGA CGGAGAACTT CATTCGCGTG TTCGATCCGG TTTACGTCCG GATCTTCGCA CGCTCGATCG GTTATGCAGG GTTGACCACG ATCATCTGCG TGGTGGTCGG GTATCCGGTC GCGTTCTGCG TTGCGCGCGC GCGCGAGGAG TGGCGGCAAC GGCTGCTGCT GCTGGTGATG ATTCCGTTCT GGACGAGCTT CCTGATTCGC ACCTACGCGT GGATCACGAT CCTGAAAAAA GAGGGATTGC TGAACGGGCT GCTCGAAGGC CTGGCGCTCC CCTCGGTCGA GCTGCTCTAC ACGCCGACGG CGGTGATTAT CGGACTGGTT TACGCTTATC TGCCGTTCAT GATCCTGCCG ATCTACGGCA GCGCGGAAAA GCTCGACGGC GCCTTGATCG AAGCGGCCTA CGATCTGGGC GCAGGACCGC TGCGCGTGTT TTCGAGCGTG ATCATCCCGC TCACGCTGCC CGGCATCGCG GCGGGTACGC TGCTGGTGTT CGTGCCGGCG ATCGGGATGT TTGCCATCAC CGACCTCATG GGTGGTGCGC GCGTGCCGAT GATCGGCAAC GTGATTCAGA ACCAGTTCAT GCAGGCGCGC GACTGGCCGT TCGGCGCGGC GCTGGGAGTT GTTTTTATGG CGTTGTTCGC CCTCACGTAT CTCATCCTGC TGCGCGTGAC CACGCGGGAG GAGCACCCAT GA
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Protein sequence | MTNDVRSSAA VGLERRRASW RAWLLLAPMV LWLVLFVVLP SVILLVYSFC ERDELGRVVY TFTTENFIRV FDPVYVRIFA RSIGYAGLTT IICVVVGYPV AFCVARAREE WRQRLLLLVM IPFWTSFLIR TYAWITILKK EGLLNGLLEG LALPSVELLY TPTAVIIGLV YAYLPFMILP IYGSAEKLDG ALIEAAYDLG AGPLRVFSSV IIPLTLPGIA AGTLLVFVPA IGMFAITDLM GGARVPMIGN VIQNQFMQAR DWPFGAALGV VFMALFALTY LILLRVTTRE EHP
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