Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3759 |
Symbol | |
ID | 6207022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4887381 |
End bp | 4888061 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641693426 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001820634 |
Protein GI | 182415568 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCTG ACACGATGAC GACTCCAATC GAAAGCCCCG AAACGATCAG CGACTTTGCG GTGATTGATG AGGTGGTGCG CGGCAACCGC GAGATGTTCG AGGTGCTCGT GCGCCGGCAC AACCAGCGGC TGTTCCGCGT CGGCATGGCC TGCCTCGGCC GGCGTGAGCT CGTGGAGGAT GCGATGCAGA ACGCGTATCT GAAGGCTTTC CTGCACCTGC CGCGATTCCG AAGGTCGGCC GCCTTCGCGA CCTGGTTGAC ACGGATCATG GTCAACGAAT GCCGGATGCT CCTGCGCAAG CAGCACACCG TGCGCGAGGA CGAGTGGCTC GAGGAGGATC ACACTGCGAT CCCGGACGAG CAGGTGACGC CGGCCGGACA GAATCTAAGC CTCAACGAAA TGAAGACGCT GCTGGAACAC GCGATCAACG AACTGCCGGG AAACTACCGC ACGGTTTACG TGATGCGGGA GATCGAGCAG CTAAACACGG CGGAGACGGC GGAATGCCTC GGACTTTCGG TGGAGAACGT GAAGGTGACG CTGCATCGCG CGCGCGAGCA GCTGAAGACG CAACTGCTGA AGAGCGCGGC GATGCCGGAG TTGTTCGCGT TCAAGGCGCC GCTGTGCAAT CCGTTCACCG CGCGGGTCAT GGCCCGGGTG CTGGAAATCT CGCGACGGTG A
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Protein sequence | MQPDTMTTPI ESPETISDFA VIDEVVRGNR EMFEVLVRRH NQRLFRVGMA CLGRRELVED AMQNAYLKAF LHLPRFRRSA AFATWLTRIM VNECRMLLRK QHTVREDEWL EEDHTAIPDE QVTPAGQNLS LNEMKTLLEH AINELPGNYR TVYVMREIEQ LNTAETAECL GLSVENVKVT LHRAREQLKT QLLKSAAMPE LFAFKAPLCN PFTARVMARV LEISRR
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