| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3706 |
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| Symbol | |
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| ID | 6206176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4814204 |
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| End bp | 4815988 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693372 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001820581 |
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| Protein GI | 182415515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.5682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAC GTCCCTTTGC TGAACTTGGG CTGTCGCCGG AGATTCTCCG CGCCGTGGAC
AAGATGGGTT TCGAGGAGGC GGCACCGATC CAGGCCGCGG TGATTCCGAC CGTGCTCGGC
GGGCGGGACG TCGTCGGAGT GTCGTCGACG GGTTCGGGAA AGACGGTGGC GTTTGCGATT
CCCGCACTCG AGCGCGTGGA TCCCAAGCTT CGCGCGGTGC AGGTGCTCGT GCTCTGTCCC
ACGCGCGAAC TCGCCGTGCA GGTGGCGGAG GAGATGGGCC ACCTCGCGCA ATTCAAGCGT
GGCATCATGG GCGTGCCGAT TTACGGCGGG CAAAGCTACG AGCGACAATA TCGAGCGCTC
GCGGCCGGCA GCCAGGTGGT GATCGGCACG CCGGGTCGCG TGATGGATCA CATGGAGCGC
GGCACGCTGA AGCTGGGCGC GCTCAAGCTG GTGGTGCTCG ACGAGGCCGA CCGGATGCTC
GACATGGGTT TCCGCGAGGA CATCGAGAAA ATCCTCTCCG CCGTGCCCGT GCCGCGACAG
CTGCTGTTCT TTTCCGCGAC GATGCCGCGC CCGATCCAGG AGCTGATCAA GCGCACCGCG
CGCGACCCGG CATGGATCAA GATCGAGGCG GTGGCACAGA ACGCGCCGCA GGTGGAGCAG
ATCTATTTCG AGGTGGATCG CCGTTCGAAG CTCGAGGCGC TGACACGGCT CATCGACGTG
CACGATTTCC GCTATGGCAT CGTCTTCTGC AGCACGAAGG TGATGGTCGA CGATCTCGAC
GAGCATCTGC ATGCGCGCGG ATACGCGGTC GACCGGTTGC ACGGTGACCT GTCGCAAACC
CAACGCGATC GGGTGATGGA TAAATTCCGC CGGCGCGGCT TCGAGTTCCT GATCGCCACC
GACGTCGCGG CGCGCGGGCT CGACGTCGAC GATCTCGAGG TGGTGTTCAA CTACGACCTG
CCGAACGACG CGGAAGACTA CACGCACCGG ATCGGCCGGA CCGGACGGGC GGGCAAGTCC
GGGCGCGCGT TCACCTTCGT GTCGGGGCAG GAGATCTACA AACTGCAGGC GATGGTCCGC
TGGGCGAAGC TCGATCTCCG GCGCGGCCGG CTGCCCTCGC TCGACGAAGT CGAGGAGGCG
CGCACCAACG TGTTCTTCGA AAAAATCCGG GCGGCGCTCG AGGCGAAGGA GTTCAAGCCG
CATGACCGGA TGATCGACCG GTTGCTCGAC CAGGGGTATG CGAGCACCGA CATCTGCTCG
GCGCTGATTC ATCTGCTGCA GGGTGGGAGC ACGGGGACGC CGGCGGCTGT TCACGAAAGC
GCGAAAGCTT CCGCGGCGGC GCCGGACTGG GCCCGAAGGA AATCTGCGCC GGAGAGCCGG
ACGGCGTTCC CATCCGAAGC GGGCGAGATC CGGCCTTCGC CCAAGGCTTC CTCCTTCGCC
AAGCCCACGC CGGACAAGAC AGCGGACGGG CTGCCCGCGC TCGCGGGGCG CAAAAAGCAA
AAATACGCGC GACCGCCGCG GACCGGGGCG GAGCCCGGCA TGTCGCCGGT GGTTCTCAAC
GTGGGGCGCG AGCATCAGGT CACGCCGGCG GACATCGTCG GCAAGATCGC GGGGGTGACG
CGCCTCGCGG CGAGCATCGT GGGCGCGATC GACATTCACG AGCGGCACAC GCTGGTGGAC
GTGGCGGAGA ACGCCGTGCC GGTCGTGATC AAGAAGCTCG CCGGGATCCG GCTCAAGGGC
GTGGCGCTTG CGCCGGTGCT GCCGACGACG ACGGGCCCGA CGTGA
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| Protein sequence | MEKRPFAELG LSPEILRAVD KMGFEEAAPI QAAVIPTVLG GRDVVGVSST GSGKTVAFAI
PALERVDPKL RAVQVLVLCP TRELAVQVAE EMGHLAQFKR GIMGVPIYGG QSYERQYRAL
AAGSQVVIGT PGRVMDHMER GTLKLGALKL VVLDEADRML DMGFREDIEK ILSAVPVPRQ
LLFFSATMPR PIQELIKRTA RDPAWIKIEA VAQNAPQVEQ IYFEVDRRSK LEALTRLIDV
HDFRYGIVFC STKVMVDDLD EHLHARGYAV DRLHGDLSQT QRDRVMDKFR RRGFEFLIAT
DVAARGLDVD DLEVVFNYDL PNDAEDYTHR IGRTGRAGKS GRAFTFVSGQ EIYKLQAMVR
WAKLDLRRGR LPSLDEVEEA RTNVFFEKIR AALEAKEFKP HDRMIDRLLD QGYASTDICS
ALIHLLQGGS TGTPAAVHES AKASAAAPDW ARRKSAPESR TAFPSEAGEI RPSPKASSFA
KPTPDKTADG LPALAGRKKQ KYARPPRTGA EPGMSPVVLN VGREHQVTPA DIVGKIAGVT
RLAASIVGAI DIHERHTLVD VAENAVPVVI KKLAGIRLKG VALAPVLPTT TGPT
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