| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3684 |
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| Symbol | |
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| ID | 6204851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4787582 |
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| End bp | 4788325 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693352 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820561 |
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| Protein GI | 182415495 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.328373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.718843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGCCA CCACCCACCT CACCGCCAAA GCCTCCCGCT CCCACCCGTC GACCGAAAAC
CTCCGCCGGG CAACCCCCGA CGCCGCGATC GATGACGAAC TGGTTCGTCG CTTCGCGCAA
GGGGACGAAG CCGCGTTCGT CGAGATCATG GAGCGCTACC GCGGCAAGAT CTTCACCGTC
ACGCTCGGCC TGCTGCGCAA CCACGCCGAC GCCGAAGAGA TCACGCAGGA CACCTTCATC
CGCGCGCACC GCGGCCTGGC CAACTTCCGC GGCGACTCTT CGCTCGCGAC CTGGCTCTAT
CGCATCGCTG TCAACTTGGC GCGCAATCGC TACTGGTATT TCTTCCGCCG CCGCCGGCAG
GACTCGCTGT CGCTCGACTG CGCGTTGAGC GAGGACAGCG CGGCGACCTT CGCCGATCTG
GTCGCCGACG TCGTGCAGGA TCCGGCGCAG GAAACTGTGG CCGGCGAATT CTCGACGCTC
GTCGATCTGT GCATGGAAAA GCTCGACGCC CGGCACCGCG AGATTCTCAC GCTGCGCAAC
GTGCTCAACC GCTCCTACGA GGAAATCGCC ACGACGCTCG GCATCAATGT CGGCACGGTC
AAGAGCCGCA TCGCCCGGGC CCGCGAGAAC CTCCGCACGC TGCTGGCCGA GGCCTGCCCC
GAGTTCGCTC CGGGGGCCGC ACCCGGCGAG TGGTTCCTTC CGAGCCGCGC TACCTACGGC
CGCCCCGCCA TCGCCTGCGC CTGA
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| Protein sequence | MPATTHLTAK ASRSHPSTEN LRRATPDAAI DDELVRRFAQ GDEAAFVEIM ERYRGKIFTV
TLGLLRNHAD AEEITQDTFI RAHRGLANFR GDSSLATWLY RIAVNLARNR YWYFFRRRRQ
DSLSLDCALS EDSAATFADL VADVVQDPAQ ETVAGEFSTL VDLCMEKLDA RHREILTLRN
VLNRSYEEIA TTLGINVGTV KSRIARAREN LRTLLAEACP EFAPGAAPGE WFLPSRATYG
RPAIACA
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