| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3668 |
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| Symbol | |
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| ID | 6204777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4763745 |
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| End bp | 4765805 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693336 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_001820545 |
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| Protein GI | 182415479 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.743452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.496513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTTT CCTCTCGTTC CCTTTCTCAA CTCGCGCTGG CGACCCTTTG CGGCCTCGCC
GCGCCACGCT CCCGTGCCGA CGACGTCGTC GCGCTGGCGC GGGTCGTCGT CACCGCCTCG
CCCAGCGAAC ATCCGCTCGT CGTCTTCGTG GATCCCAAAG CTCCTGCGCA ACCCATCCCG
GCCCACGACG GCGCCGAGGC GCTCCGCAGC GTGCCCGGGT TTGTCCAAAT CCGCAAAGCC
GGGACCGATG GCGATCCGGT CTTTCGTGGG ATGGCCGGCT CGCGACTCGG GATCCTGCTC
GACGGCGAAA CCATCCTCGG TGGCTGCGGC AACCGCATGG ATCCGCCGAC TGCGTATGTT
TTCCCGTCCG CTTACGACAA GATCACCGTG CTCAAGGGCC CGCAGACCGT GCTCTACGGT
CCCGGCAACT CCGCCGGCGT CGTGCTTTTC GAGCGCACGC CGGTCCGCTA CCCGGAGCCC
GGCGCGACGC TCACCGGCGC GCTGACGTTC GGCTCCTTCG CGCGCAACGA CCAATTCGTC
GACGTGCGCG CCGGAGCGCC ACTCGGCTAT GTCCAGGCCG CGGCCACGCG CACGACGGCG
GACGACTACC GCGATGGTTC TGGGCGCGCC GTGCCGTCGC ACTACGAACG CTGGAGCACG
CACCTCGCGG CAGGCTGGAC GCCGGATGCG CAAACAACCG TGGAGCTCTC CGGGGTCGTG
AGCGACGGCG AGGCGGCCTA CGCCGACCGC GCGATGGATG GCACGAGCTT CGATCGCCGC
AACCTGGGCC TTCGCGTGCG GCGCAGCGAG ATTTCCCCCT GGCTCGTGCT GCTCGAAGCG
AGCGCGTTCG TGAACGCGGT GGACCACGTG ATGGACAATT TCTCGCTGCG GCGTTTCACC
CCCACGGCGA TGATGCCGGG CCGCGCCGTC TCCAACCCGG ACCGGTTCAC GATCGGCGGC
CGCGCCGCAG CGACGCTCGC GCTCGGCGTC GACACGCGCG TCGTGACTGG TCTCGATTAC
CAGGAAAACC GGCATAGGCT CCGCTCGACG CGCGACGACC CGACCGATCC TTTCGCGACC
AAACGCCGGA TGCGCGATGC GAGCTTCGAC GTGACCGGGC TTTTCGCCGA GGTGACGCAC
CTGCTCACGC CGGCCGATCG GCTCGTTGCC GGCGGCCGGC TCGACTCCTG GCGCGCGCAC
GATGAGCGCA CCGCGGTGGC AGTCGGCATG GGCACGATGC CGAATCCGAC GGCGCAACTG
CACCGCGACG CGTCGCTGAC GAGCGGTTTC CTGCGCTACG AACATGATCT TCGCGCCATG
ACCACCGCCT ATGTCGGTGT CGGACACGCC GAACGATTTC CCGACTACTG GGAACTGGTC
AGCAAGGAGA GCGCCGGCAG CGTGAGCGCA TTTCGCGCCG CGCCGGAACA CACGACGCAG
CTCGATGTGG GCGTCACGCA TCGCGCCGGC AGCCTCACCG CCTCGCTCGC GCTGTTTGCC
AGCCGGATCG ACGACTACAT CCTGATTCAA AGCAACGTGG CGAAGCCCGC CGCGATGGGC
GCCACCCGGA TGGCAACGAT CACCCGCAAT GTCGACGCCG TGACCCGCGG CGGCGAGGCG
AGCGTTTCGT ACACCCTCGG CGGCTGGCGT GCGGACGCGT CGATCGCCGG CGTCTACGGA
CGGAACCGCA CCGACGACCG GCCCCTCGCG CAGCAGCCGC CGCTCGAGAC GCGGCTGGGC
CTCAGCTATT CGACGCCGCG CTGGTCGCTG GGCACGCTCG CCCGCTGGGT CGACGCGCAG
GACCGGTTCG CCCGCAACCA GGGTAACATC GTCGGGCAGG ATCTTGGACC GACGGCGGGA
TTCACCGTGT TCTCGATCAA CGCCGGCTGG AAGCTGCACG AGCACGCGCA GCTCACCGCG
GGCGTCGACA ATCTCACCGA CAAAACCTAC GCCGAGCATC TCAGCCGCGG CGGCGCGATG
GTCGCCGGCT TCCCGCCCCC CACGCTGCGG ATCAATGAAC CCGGGCGAAC CTTTTGGGCG
AAGCTGCAGG TCAGCTTTTA G
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| Protein sequence | MHLSSRSLSQ LALATLCGLA APRSRADDVV ALARVVVTAS PSEHPLVVFV DPKAPAQPIP
AHDGAEALRS VPGFVQIRKA GTDGDPVFRG MAGSRLGILL DGETILGGCG NRMDPPTAYV
FPSAYDKITV LKGPQTVLYG PGNSAGVVLF ERTPVRYPEP GATLTGALTF GSFARNDQFV
DVRAGAPLGY VQAAATRTTA DDYRDGSGRA VPSHYERWST HLAAGWTPDA QTTVELSGVV
SDGEAAYADR AMDGTSFDRR NLGLRVRRSE ISPWLVLLEA SAFVNAVDHV MDNFSLRRFT
PTAMMPGRAV SNPDRFTIGG RAAATLALGV DTRVVTGLDY QENRHRLRST RDDPTDPFAT
KRRMRDASFD VTGLFAEVTH LLTPADRLVA GGRLDSWRAH DERTAVAVGM GTMPNPTAQL
HRDASLTSGF LRYEHDLRAM TTAYVGVGHA ERFPDYWELV SKESAGSVSA FRAAPEHTTQ
LDVGVTHRAG SLTASLALFA SRIDDYILIQ SNVAKPAAMG ATRMATITRN VDAVTRGGEA
SVSYTLGGWR ADASIAGVYG RNRTDDRPLA QQPPLETRLG LSYSTPRWSL GTLARWVDAQ
DRFARNQGNI VGQDLGPTAG FTVFSINAGW KLHEHAQLTA GVDNLTDKTY AEHLSRGGAM
VAGFPPPTLR INEPGRTFWA KLQVSF
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