Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3652 |
Symbol | |
ID | 6206593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4741648 |
End bp | 4742517 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693320 |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_001820529 |
Protein GI | 182415463 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.197774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.740521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTCC TTCGTGCCAA GAGCGCCGGG TTCTGTTGGG GAGTCGAGCG CGCCATCGAG ATCACGCGCG ACTACGCGCA CCAAGGACGG AAGCCCGTCT ACACGGATGG CCCGTTGATC CACAACCGCC AGATGATGGA GAAGTTGTCC GAGGAGGGCA TCCGCGAGGT CGGCGACTAC CAGAGCCGCG CGAACATCGC GGTGAACCCC GCCGCCCCGG GCGAGAATCC CGTGATGGTG GTGCGCGCGC ATGGCATTTC GCCGGAGCGG CGCAACTACC TGAAAAGCCT CGGCATGGAC TTCAAGGACG CGACGTGTCC CGACGTCGGC ATCATCGCGG GCAAGATCCG GCTGCACGCC AAGAAAGGCT ACGCGACGAT CATCTTCGGC GACAAAAATC ATCCGGAAGC GATCGGGCTG TTGGGTTACA CGGAGGGTCG CGGCTACTGC ATCACGAGCA AGGCGGACAT CGATGCGCTG CCGGCGCTCG AGCGCGTGTG CATGGTTTCC CAATCGACGA TGTTCATGCA CGAATTCGCC GAGCTCTCCG AATATGCGCG GCAGAAGTTC AAGGAAGTGC TGGTGTTCGA CACGATCTGT CAGGCGACGA AGGACCGGCA AACCGACGTC GTCGCACTCG CGCGTCAAGG CGCGCAGGCG ATCGTCGTCA TCGGCGGCCA TCACTCGGCG AACACGGTGA AACTGGCCTC GCTCGCGCGG TTGCAGAACC TGCCCACGTA TCACATCGAA ACCGCCGCCG AGCTTTCGCC GGAGGAGATG AAAAAGTTCA CCGTGATCGG CGTCACCGCC GGCGCCTCGA CGCCCGAATT CCTGATCAGC GAAGTCTGCG CGAAGCTCGA GGCGTTGTGA
|
Protein sequence | MKVLRAKSAG FCWGVERAIE ITRDYAHQGR KPVYTDGPLI HNRQMMEKLS EEGIREVGDY QSRANIAVNP AAPGENPVMV VRAHGISPER RNYLKSLGMD FKDATCPDVG IIAGKIRLHA KKGYATIIFG DKNHPEAIGL LGYTEGRGYC ITSKADIDAL PALERVCMVS QSTMFMHEFA ELSEYARQKF KEVLVFDTIC QATKDRQTDV VALARQGAQA IVVIGGHHSA NTVKLASLAR LQNLPTYHIE TAAELSPEEM KKFTVIGVTA GASTPEFLIS EVCAKLEAL
|
| |