Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3645 |
Symbol | |
ID | 6207753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4731591 |
End bp | 4732799 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693313 |
Product | hypothetical protein |
Protein accession | YP_001820522 |
Protein GI | 182415456 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.52542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCTTCC GCTCCATCAT CATCGTCGCG CTCCGCGCCC TCCGCCGCAA CAAGCTGCGC TCGATGCTCA CCGCCCTCGG CATCATCATC GGTGTCGCCG CCGTGATCGC CATGGTCAGT ATCGGCAACG GCGCAAAAGC GCAGGTCGAA GCGCAGGTCG CCAGCCTCGG CCAGAACGTC ATCACCGTTT TCTCCGGCAG CTTCACCGGC GGCGGCATGC GCGGCGGCTG GGGCAGCGCG CCCACGCTCA CGGTCGAGGA CGCGCTGGCC ATCGGCAACG AGGTGCCCGG CGCCATTGCG GTCAGCCCCG AGGTCCGCGA TCGCAACCAG GTTCTCGCCA ACGGACTCAA CTGGAACACG CTCGTGAACG GCGAATCGCC CGACTACGGC GAGATCCGCG GCTGGAAGGT CGCCAGCGGC ACGATGTTCA CCGACCAGGA TGTCCGCAGC GTGGCCAAGG TCGCCGTCAT TGGGAAGACC ATCGCCGATC AGCTGTTCCC CAACGAGGAT CCCATCGGCC AGACGATCCG GATCCGGAAC ATCCCGTTCA AGGTCGTCGG TCTGCTCGAG GCGAAGGGCT TCAATCTTTT CGGACAGGAC CAGGACGATA TCGTGATCGT CCCCTACACG AGTCACATGA AACGGCTGTC GCGCCGCACG AACGTCAGCT CGATTCTCGT ACAGGCGCCC AGCGCGGAAC AGATCCAGCG CGTCCAGGAC GAGATCACCG ATTTGCTCAC GCAGCGGCGC AAGGGCAAGG AGCCAGACTT CACCGTGCGC AACCAAGTCG AGCTCGCGCA GGTCGCGACG GCGAACACCC GCACGATGAC CATCTTCCTC GGGATCACCG CCAGCATTTC GCTCATCGTC GGCGGCATCG GCATCATGAA CATCATGATG GTCTCGGTGA CTGAACGCAC CCGCGAGATC GGGATCCGGC TCGCGGTCGG CGCGCACGGC CGCGACGTGT TGCTGCAGTT CCTCGTCGAG GCGGTGATCC TCAGTTCGCT CGGCGGGCTG CTCGGCATCG CGCTCGGCGT CGGCTCGTCG AAACTCGTTT CGATCATCAA CGACTGGCCG GTGCTCGTCT CCACGCCCTC GGTCGTACTC TCGTTTGTCG TGAGCGCGGC CGTCGGAATG TTCTTCGGCT TCTACCCCGC CCGGAAAGCC GCGCAGCTCG ATCCGATCGA CGCGCTCCGT TACGAGTAG
|
Protein sequence | MRFRSIIIVA LRALRRNKLR SMLTALGIII GVAAVIAMVS IGNGAKAQVE AQVASLGQNV ITVFSGSFTG GGMRGGWGSA PTLTVEDALA IGNEVPGAIA VSPEVRDRNQ VLANGLNWNT LVNGESPDYG EIRGWKVASG TMFTDQDVRS VAKVAVIGKT IADQLFPNED PIGQTIRIRN IPFKVVGLLE AKGFNLFGQD QDDIVIVPYT SHMKRLSRRT NVSSILVQAP SAEQIQRVQD EITDLLTQRR KGKEPDFTVR NQVELAQVAT ANTRTMTIFL GITASISLIV GGIGIMNIMM VSVTERTREI GIRLAVGAHG RDVLLQFLVE AVILSSLGGL LGIALGVGSS KLVSIINDWP VLVSTPSVVL SFVVSAAVGM FFGFYPARKA AQLDPIDALR YE
|
| |