Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3618 |
Symbol | |
ID | 6204514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4702273 |
End bp | 4704306 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641693286 |
Product | excinuclease ABC, B subunit |
Protein accession | YP_001820495 |
Protein GI | 182415429 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.29538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTTCA AACTCCACGC CGACTACCAG CCGACGGGCG ACCAGCCGCA GGCGATCGAG CAGCTCGTGG CCTCGATCCA CGCCGGGAAT CGCCATCAAA CGCTGCTCGG CGTCACCGGC TCCGGCAAAA CCTTCACGAT GGCCAACGTG ATTGCGCGGT GCGAGCGGCC GACGCTGATC ATCTCGCACA ACAAGACCCT CGCGGCGCAG CTCTATTCCG AGTTCAAGAA TTTCTTCCCG GAGAACGCGG TCGAATACTT CGTCAGCTAC TACGACTACT ACCAGCCCGA GGCCTACATC GCGTCGAGCG ACACCTACAT CGAGAAGGAC TCGTCGATCA ACGAGGAGAT CGAACGGCTG CGGATCGCGG CGACGAGTTC GCTCGTGTCG CGGCGCGATG TGGTGGTCGT GGCCAGCGTG TCGTGCATCT ACGGCCTGGG CTCGCCGGAG GAGTTCACCG AGCTGCGGAT TCCGCTCCGG CGTGGCGAAC AGCTCGGTCG GCATCGCTTC CTCGAACGGC TGGTCGACAA TATTTACGAC CGGAACGACT ACGAGCTGAA GCGCGGCACC TTTCGCGTGC GGGGCGACGT CGTCGACGTG ATGCCGGCGT ATCTGGAGCA CGGACTGCGC GTCGAGTTTT TCGGCGACGA GGTCGAGGCG ATCACCGAGT TCGATCCGGT TTCCGGCAAG GTGCTGCGCA ATCTCGAGCA ATTCGATCTT TACCCAGCGA ACCAGTATGT CACCTCACGC GGCCGGCTCG ACCCGGCGAT CCGCTCGATC AAGGCGGAGC TCGACGAGCG CGTGGCCTAT TTTGAGCAAA AAGGCCAGTA TCTCGAGGCG CAGCGGGTCC GGATGCGGAC CAACTATGAT CTGGAGATGC TGCAGGAAAT GGGCTTCTGC AACGGCATCG AGAACTACTC GCGGCATCTC ACCGGTCGGA AGGCGGGCGA GCGGCCGTTC TGCCTGATCG ACTTTTTCCC GAAGGATTTT CTGCTGATGA TCGACGAGAG TCACGCGACC GTGCCGCAGA TCGGCGGCAT GTTCAACGGC GATCGCGCGC GCAAGCAGAC GCTGGTCGAT TTCGGCTTCC GACTGCCGTC GGCGCTGGAC AACCGGCCGC AGACTTTCGA GGAGTTCGAG CAGATCACGC ACCAGGCGTT GTATGTCTCG GCCACGCCGG CCGAGTTCGA GCTGAAGCGT TCGACGGTCG TCGCGGAGCA GCTCGTCCGA CCGACGGGGC TGCTCGACCC CGAGATCGTG ATTCGGCCAA CGAAGGGACA GGTTGAGAAC CTGATTGGCG AAATCAAAGC CGCCGCGGCC GCGGGCGAGC GCGTGCTCGT GACGACGTTG ACCAAGCGGC TGTCGGAAGA CCTGACGAGT TATCTGCGCG AGGCGAAGAT CCGCGTGGAA TATCTGCACT CGGACATCGA TGCGATTGAG CGCGTCGAGA TCCTGCGCAA TCTCCGGCTG GGCAACTTCG ACGTGCTGAT CGGGATCAAC CTGCTGCGCG AAGGCCTCGA TCTACCCGAA GTGGCGCTGG TCGCGATCCT GGACGCGGAC AAGGAAGGCT TCCTCCGCAG TGAGACGAGC CTGGTGCAGA CGGCAGGCCG CGCGGCGCGA CACGAGAAAG GGCGCGTCAT CTTTTATGCC GACAACATCA CCGAATCCAT CCGCCGCACG GTGGAGATCG TGAAGTACCG GCGGGAAAAA CAGCTCGCCT ACAACGTCGA GCACGGAATC ACGCCGCGGA GCGTGAAGCG CGCGGCGCAG GCGAGCCTGC ATGTTTACGA TGGAAGTGGC GAACGCGACG AGGCGGCGGT GGCTGAGGAA GTCGATGACG TCGCCGCCGT GATCGCCGAG TTGGAAGACG AAATGCAGGA GGCGGCGGGC CGGCTGGAGT TCGAGCGCGC CGCGGTGCTG CGCGATCAGA TCAACGCGCT CAAGTCGGGC GAGTATCGCA AGCCGGCGAA ACCGCTCGCC GCGAAATATC CGAGTCGGAA ACCGCGAGCC AAGGCGAGCG GCCGGCGGCG GTAA
|
Protein sequence | MLFKLHADYQ PTGDQPQAIE QLVASIHAGN RHQTLLGVTG SGKTFTMANV IARCERPTLI ISHNKTLAAQ LYSEFKNFFP ENAVEYFVSY YDYYQPEAYI ASSDTYIEKD SSINEEIERL RIAATSSLVS RRDVVVVASV SCIYGLGSPE EFTELRIPLR RGEQLGRHRF LERLVDNIYD RNDYELKRGT FRVRGDVVDV MPAYLEHGLR VEFFGDEVEA ITEFDPVSGK VLRNLEQFDL YPANQYVTSR GRLDPAIRSI KAELDERVAY FEQKGQYLEA QRVRMRTNYD LEMLQEMGFC NGIENYSRHL TGRKAGERPF CLIDFFPKDF LLMIDESHAT VPQIGGMFNG DRARKQTLVD FGFRLPSALD NRPQTFEEFE QITHQALYVS ATPAEFELKR STVVAEQLVR PTGLLDPEIV IRPTKGQVEN LIGEIKAAAA AGERVLVTTL TKRLSEDLTS YLREAKIRVE YLHSDIDAIE RVEILRNLRL GNFDVLIGIN LLREGLDLPE VALVAILDAD KEGFLRSETS LVQTAGRAAR HEKGRVIFYA DNITESIRRT VEIVKYRREK QLAYNVEHGI TPRSVKRAAQ ASLHVYDGSG ERDEAAVAEE VDDVAAVIAE LEDEMQEAAG RLEFERAAVL RDQINALKSG EYRKPAKPLA AKYPSRKPRA KASGRRR
|
| |