Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3537 |
Symbol | |
ID | 6207477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4607066 |
End bp | 4607854 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641693205 |
Product | hypothetical protein |
Protein accession | YP_001820414 |
Protein GI | 182415348 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0865051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACT ACCTGCGCAT CTGGTTCGCG AGCGTTCGCT ACTGTCTCGT GCGGACGATG ATGTTCCGTT TCGACTTCTT CCTGTGGTCG GCGGTGGAGC TCGGCTGGAT GGCGGTCAAC GTGCTGATGG TTTCGGTCAT CTACCGGCAC ACCGACAGCA TCGCCGGCTG GAACAAATAC GAGATGCTGC TGCTGATCGG CACCGGCATG CTGATTCAGC GTTTCCTCAT GGGTTTCTTC TGGAGCAGCA TCTACGAGCT CGGCCGCAAT GTCCGCACGG GCCACTTCGA CTTCTTCATC GCCCAGCCGG GCAATGTCAT GTTCATGGCC ACCACGCGAA AGCTCGATCC GGACAGCTTG ATCAACTCGC TCGTGGCCGT GGCGCTCGTG ATCTACTCCG GCCGGCAGCT CGGGCTCTCG CCCAGTTTTG CTGACGCCGC ACTCTACGCC CTGCTCGTCG CCGGCGGCAT CGTGATTCAC TACAGCATCC TCGTGATGTC GATTTCGCTC TCGTTCTGGA TCACCAGCGC GCAAGGCGTC GAGGGCAGCT ATTTCTCGCT GATGGAATTC TCGCGTCTGC CGCGCGAGGC CTTTCGCGGG ATCGCGAGCT TCGTCTTTGT CTGGCTGCTC CCCGTGGTGG TCGTGAGTAA CGCCCCTGCC CGCACCTTGC TTTACGGCTT CGATCCGGTC TGGGCCTTCT GGCTCTGCGG CATCGCGGTC GTGTGGTTCG GACTCGCGGT CCTGATGTTC AACGCCGGAC TGCGCCGCTA CTCCAGCGCC AGTTCGTAG
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Protein sequence | MLHYLRIWFA SVRYCLVRTM MFRFDFFLWS AVELGWMAVN VLMVSVIYRH TDSIAGWNKY EMLLLIGTGM LIQRFLMGFF WSSIYELGRN VRTGHFDFFI AQPGNVMFMA TTRKLDPDSL INSLVAVALV IYSGRQLGLS PSFADAALYA LLVAGGIVIH YSILVMSISL SFWITSAQGV EGSYFSLMEF SRLPREAFRG IASFVFVWLL PVVVVSNAPA RTLLYGFDPV WAFWLCGIAV VWFGLAVLMF NAGLRRYSSA SS
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