| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3496 |
|---|
| Symbol | |
|---|
| ID | 6207805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4549170 |
|---|
| End bp | 4551401 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641693163 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_001820373 |
|---|
| Protein GI | 182415307 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.847425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.281142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCACC GTCCTCTTTT CCGCCGTCTG GCGCTCGCCT CCGGGGCGCT GATTTCGTTG
CTCGCCGTCA CGTCGACGAA CGCCGCGAGC GATCGCAAGT TCGTCACCAC CCCCACGCTG
TCGGTCGAGG CCCGCACGCT CGTCAACCTG CTCGAACAGG CCCACTACAA CCGCGATGCG
GTCGATCCCG CCGACTACGG CCAGGTCGTG GAAAACTACA TGGGCGACCT GGACGGCCAG
CGGCTCTTCT TCCTCGCCAC CGACAAGCAG AAGTTCAACG AGCAGTTCGG CGGCAAGGCC
ATTTACTGGA ACCTTTATTC GCTCGGCAAT ATCGACGCGG CGTACGAGAT TTTCCGCCTC
TACGAGGATC GCGCGCACGC GCGGATCAAT TGGATTTTTG AGGAGCTCAA CAAGGAGTTC
GATCTCTCGG GCCAGGACAC CTACCGCGTG GATCGCAGCA AATCCGAATG GGCGGCGACA
CCGGCCGCCG CCGACGCGCT CTGGCGCCAG CGGTTGAAGT TCGAGCTCAT CTCCGAGCTC
ATGAACAAGA AGTCGATGGA CGAGGCCAAG CAGACCGTCC GCAAGCGCTA TGAGCGGATG
CTGAAGAACG TGGCCGACCT CGAGCTCAAC GATGTGGCGG AGTTGTTCCT CTCGAACATC
GCCCGGATCT ACGATCCGCA TTCGACCTAT TTCTCGGCCG ACACCTTTGA GGACTTCGGC
ATTCAGATGA AGCTCCAGCT CGTCGGCATC GGCGCCCTGC TCGGGATCGA GGAGGACTAC
TGTTTCGTGA AGGAAATCGT TCCGGGCGGT CCCGCCGACC TGGGGAAGCA GCTCAAACCG
AACGACAAGA TCATCGCCGT GGCCCAGCCC GGAAGCGAGC CCGTCGAGAT CATCGGCATG
AAGCTCCGCA AGGTGGTCGA GATGATCCGC GGCACCAAGG GCTCGCAGGT GAAGCTGATC
GTCGAGCCGG CGGACGCCAC CGATGCCTCG ACGCGGAAGG AGATCACGAT CGTGCGCGAC
GTGGTGAAAC TGAATTCCGC GCGCGCCCGC GCGGCGGTGT TCCAAGTGCC CGACGCCACC
GGGCAGACCA CCGTGCCCCT CGGCGTGATC ACGCTGCCCG CCTTTTACGG CCCCGCCGAC
AGCGAGGATC CCGAGGCCGA GAAGACCAGC GCGACGAAGG ATGTCGCCCG GCTGATCGAA
CAGCTGAAGG ACGCCGGCAT CAAGGGCCTC GTGCTCGATC TCCGCCACAA CGGCGGCGGC
TATCTGAGCG AAGCCGTCGA TCTCACGGGT CTGTTCATCT CGCGCGGTCC TGTCGTGCAG
GTGAAGAACT ACGCCGGCGA AATTCAGATC GACAACGACA ACGATCCCGC CGTCGCCTAC
CAGGGCCCGC TCGCCGTCCT CGTCGACCGC TTCAGCGCCT CCGCGTCGGA GATCGTCACC
GGGGCGTTGC AGAATTACGG CCGCGCGATC GTGATCGGCG ACACCTCCAC GCATGGCAAG
GGCAGCGTCC AGACCGTGCT GGAGATGAAG AACCTCGTGC CGCAACTGGC GCGCACCGGC
GAGAAGAGCG GCGCCGCCAA GTTCACGGTG CAGAAATACT ATCTGCCGAA CGGCTCCTCC
ACGCAGCTCA AAGGCGTCGT CCCGGACATC GTCCTGCCGT CGATCGACGA ATTTCTCCCC
ATTGGCGAAG GCAGCCTGCC GCACGCGCTC GTCTGGGATG AGATCCCGAC GAGCTTCTTC
GACGGTTCGC CGCTTGATGC AAAAGTGCTC ACCACGCTGC GCGAAGCCAG CCAGCGCCGG
CAGGCGCAGC TCGATGAGTT CGCTTATCTC CGGAAGAACG TCGACTGGTT CAAGGTTCGC
CAGGAGCAGA AACTCGTGTC GTTGAATTTG CAGGCGCGGC AGCAGCAAAA GGAAACCGAC
GAGACCTTCC GCAAGGAAAT GAAAACCAAG AAGGAGGAGC TCGCGAAGTC GGACTTCCCC
TTCCGTGAAT TCCGTCTGGG CCCACCGCCA CCGCCGAAGA TCAAGGCCGA GCCCAAGGAG
GGCGACCTCC CGGAAGCCGT CGAGGACGAG CTTAGCACGG ACGAGAGTGA CGAGAGCTAC
GCCAAGGTCG ACGTGCACCT GCGCGAGTCG CTGCGCGTCC TGAACGATGC CGTCGAGCTC
GGCGAAAGCC CGCAATACTG GGCCAGCAAC CACCCGCCGC TCACCTTGGC GGCCGTCAAT
CGCAAGGGCT GA
|
|---|
| Protein sequence | MLHRPLFRRL ALASGALISL LAVTSTNAAS DRKFVTTPTL SVEARTLVNL LEQAHYNRDA
VDPADYGQVV ENYMGDLDGQ RLFFLATDKQ KFNEQFGGKA IYWNLYSLGN IDAAYEIFRL
YEDRAHARIN WIFEELNKEF DLSGQDTYRV DRSKSEWAAT PAAADALWRQ RLKFELISEL
MNKKSMDEAK QTVRKRYERM LKNVADLELN DVAELFLSNI ARIYDPHSTY FSADTFEDFG
IQMKLQLVGI GALLGIEEDY CFVKEIVPGG PADLGKQLKP NDKIIAVAQP GSEPVEIIGM
KLRKVVEMIR GTKGSQVKLI VEPADATDAS TRKEITIVRD VVKLNSARAR AAVFQVPDAT
GQTTVPLGVI TLPAFYGPAD SEDPEAEKTS ATKDVARLIE QLKDAGIKGL VLDLRHNGGG
YLSEAVDLTG LFISRGPVVQ VKNYAGEIQI DNDNDPAVAY QGPLAVLVDR FSASASEIVT
GALQNYGRAI VIGDTSTHGK GSVQTVLEMK NLVPQLARTG EKSGAAKFTV QKYYLPNGSS
TQLKGVVPDI VLPSIDEFLP IGEGSLPHAL VWDEIPTSFF DGSPLDAKVL TTLREASQRR
QAQLDEFAYL RKNVDWFKVR QEQKLVSLNL QARQQQKETD ETFRKEMKTK KEELAKSDFP
FREFRLGPPP PPKIKAEPKE GDLPEAVEDE LSTDESDESY AKVDVHLRES LRVLNDAVEL
GESPQYWASN HPPLTLAAVN RKG
|
|---|
| |