| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3486 |
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| Symbol | |
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| ID | 6207521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4533688 |
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| End bp | 4535784 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693153 |
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| Product | helicase c2 |
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| Protein accession | YP_001820363 |
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| Protein GI | 182415297 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCC TGCGCGACGA TACCGACTCG GCCCTGCCGC CGCCCGCCGC GAGCCGGGCG
CCCGAGCTGG TGGCGCGCGT CTTCGCGGAA GGAGGCTGGC TGCAAGACGC GCTGCAGCTC
GAGCATCGGC CGGAGCAGGA GCAAATGGGG CGCGCCGTGG CGGCGGCATT TCGCGACGAC
GCGCCGCTGT TGTTCGAAGC CGGCACCGGG GTGGGCAAAT CGCTGGCCTA TCTCGTGCCG
GGCATCCTCC ACGCGATCGA CCAATCCCGC CAGCTGATCG TCTCCACGCA TACGATCTCG
CTGCAGGAGC AACTGGAGAC GAAGGACCTC CCGATCTGTC GGCGGCTGTT CCGCTCGAAT
CCCGCGCTCG CCCGCTACGC CGATTTCAAG GCCACGGTGC TGGTCGGAAA ATCCAATTAT
CTTTGCACCA CGCGGCTCGC GCACGCGCTC GCCGATCGCG CGACGCTGTT CGCCGATGCC
GAGTACGACG AGCTCCAGCG GATCGCGGCC TGGGCCGGCA AGACCGAGAC CGGACTCCGT
CACGAGTTGC GGCCGCCGCC GCGACCCGAG GTGTGGGACG TGGTGAACGC CGACTCGTCC
TCGTGTTCGC GCAAGCACTG CGACTGCGAG AAATGCTTTT ATCAGCGCGC GCGGGCCCGG
CTGCGCGCGG CGAACGTCAT CGTGGTCAAT CACGCGCTGC TCTTCGCGCT GATCAACGCC
GGCGGCGCAC AGGCCCACGG CGCAACCACC GATGCGCGCG GCGTACTGTT CCCCGACGAT
TTCGTCGTGC TCGACGAAGC GCACACCGTG CCCGACGTCG CCACGGAAAA CTTCGGCCTC
TCGCTTTCGA GCTACGGCGT GGAGCGAGCA CTCAAGTACC TCTACAATCC CCGCACGCAG
CGCGGGCTGT TGCGCAAACG CGGCGGCGCG GAGGCGCAAC AGCTGGTGCT CGACGCACTC
GACGCCTCCC GGCAGTTCTT CGATTTCATC GCGAACTCGC TGCTCACGCC CCGTCCGGTG
GTCCGCGTGC GCGAACCCGA GGCCGCGGAG CCGCTGCTCG ACGGCCCGCT GACCGCGCTG
CACCGGCTGC TCGGCAAGCT CGCCGACAAG CTCGACGAGG GCCGCGAGCG CGACGAGCTC
CTCGAGCAAA AGCTGCGCAT CAAATCGCTT CAGGCCGGCG TCACCGAGTG GCTGACGCTC
GGCGATCCCG GCCACGTGTA CTGGGCGGAG CGCTCGGGTC GGAAGCAGAC GATCGTGACG
CTGCGCAGCG CGCCGATCGA CGTCGCGCCC GAGCTGCGGC AGCACTTGTT CGGCTGCAAC
ACCAGCGTGG TCTGCACCAG CGCCACGCTC GCGATGGGCG GCGAGATCGC CCCGTTCGCC
GCGCGGATCG GCGCCGACGA CGCGCGCGCC GTCGCGGTGA AATCGCCGTT CGACTTCGAA
CACCACATGC GCGTGTACGT GGCCACCGAC GTCCCGCTGC CGTCGCCGCA GGAGGCACGG
CTCGCGCTGG ATGCGCTGAC CGACTACATC CGCTTCTGCA CGGAGCGCGT CCGCGGCGGA
TCGCTCGTGC TGTTCACCAG CTATGCGGAC ATGCGGGCGA TCGCCACGAC CCTCGAGCCG
GTCTATCGCG CGGCCGGGCG GCCGTTCATG ATGCAAGGGG CGGAGCTCTC GCGCACCGAA
CTCGCCCAAC AGATGCGGCA CCTCGGCAAC GCGGTGCTGT TTGGCACCGA CAGCTTTTGG
ACCGGCGTCG ACGTGCCGGG CGACGCGCTC GCGCAAGTGA TCATCACCCG GCTGCCCTTC
GATCCGCCGA CGCACCCGAT CACCGAGGCG CGGTGCGACC ACATCCGCGA CCGCGGCGGG
AATCCGTTCA ACGAACTCAC GCTGCCCGAC GCGTTGATCA AATTCCGCCA AGGCGTGGGC
CGGCTGATCC GCACGGCCAC CGATCGCGGA CTGATCACGA TCCTCGACTC GCGCGTGCTG
GCGAAGAGTT ACGGCCGGCT CTTCGTCGAG TGCCTGCCCA ATCCAAATTT TATGCGTTTG
AGCCGTCGCG ATCGCGAGGA ACGATTTCTG CCTTTCGCGA GTCCGCCGGC GCGCTAA
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| Protein sequence | MIGLRDDTDS ALPPPAASRA PELVARVFAE GGWLQDALQL EHRPEQEQMG RAVAAAFRDD
APLLFEAGTG VGKSLAYLVP GILHAIDQSR QLIVSTHTIS LQEQLETKDL PICRRLFRSN
PALARYADFK ATVLVGKSNY LCTTRLAHAL ADRATLFADA EYDELQRIAA WAGKTETGLR
HELRPPPRPE VWDVVNADSS SCSRKHCDCE KCFYQRARAR LRAANVIVVN HALLFALINA
GGAQAHGATT DARGVLFPDD FVVLDEAHTV PDVATENFGL SLSSYGVERA LKYLYNPRTQ
RGLLRKRGGA EAQQLVLDAL DASRQFFDFI ANSLLTPRPV VRVREPEAAE PLLDGPLTAL
HRLLGKLADK LDEGRERDEL LEQKLRIKSL QAGVTEWLTL GDPGHVYWAE RSGRKQTIVT
LRSAPIDVAP ELRQHLFGCN TSVVCTSATL AMGGEIAPFA ARIGADDARA VAVKSPFDFE
HHMRVYVATD VPLPSPQEAR LALDALTDYI RFCTERVRGG SLVLFTSYAD MRAIATTLEP
VYRAAGRPFM MQGAELSRTE LAQQMRHLGN AVLFGTDSFW TGVDVPGDAL AQVIITRLPF
DPPTHPITEA RCDHIRDRGG NPFNELTLPD ALIKFRQGVG RLIRTATDRG LITILDSRVL
AKSYGRLFVE CLPNPNFMRL SRRDREERFL PFASPPAR
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