| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3378 |
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| Symbol | |
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| ID | 6208681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4430178 |
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| End bp | 4432937 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693043 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820255 |
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| Protein GI | 182415189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.825793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTT CCCTCAAAAC CGGATTCACA TTCGCTTTCG TCGGGCTGCT TGGATTCTTC
ACGGCGCAGT CGCTCCCGGC GGAGCAGCCG TTTGCCGCCC ATGGCGAGCG GTCGTCCGCC
CAACTGCGTG AACGGCTGCC CCTGAACGAC GACTGGCGAT TTCAAAAAGA CGATCCGCCG
GGCAACACCG TCAGTCTCGA CTACGATGTT CGTCCCGTGG TGACGACGAA CCAGGACGGC
CGGGCGGCGG ATGCCGAGCC GACGGAAGCC GAGAAGCTCG CCGCCGCCTC GCGCGTGGTG
CTGAAGCCGT GGATCCTGCC GACCGGGAAT GCGTTCATCA AGGATCCGGC GCCTCGATAC
ACCCGGCCGG CGGGCGACCC GGGCAGCGAC GTGGCGTATG TGCGGGCGGA TTTCGACGAT
CAAGCCTGGC GGCGCGTGAA CCTGCCGCAT GACTGGGCGA TCGAAGGGCC GTTTCTCACC
ACCGGCGATT TCGGCGGCAT GGGCAGGCTG CCCAGCTGGG GCATCGGCTG GTATCGGAAG
GCGTTCGATC TTCCCGCGGA GGACGCCGGC AAATCGATCG TCCTCGAGGT GGATGGCGCC
ATGTCGTACG CGACGGTCTG GTTGAATGGT CACCTCGTGG GCGGCTGGCC GTATGGCTAC
TCGTCGTGGC AGGTGAACCT GACGCCTTAC CTCGCTTTTG GCGGCAGAAA CCAACTCGCG
ATCCGGCTCG ACAATCCGCC CGCCTCGTCG CGCTGGTATC CGGGCGGCGG GATTTATCGC
AACGTGTGGC TGACGAAGAC GCAGCCGGTG CACGTCGGCC AGTGGGGCAC CGCGGTAACG
ACGCGTGACG TGACGTCGCG TTCGGCGACG ATCGAGCTCG CGGTCACCGT CGACAACGAC
GGCCGGGAGC CTGCGCCGAT CAGCGTGAGC TCGGAGATCT TCGCGCTGGA TTTGCAGGGC
CGGAAAACGG CGGAGGTGGT CGCGCGGACG GAGGCCATTG AAACCCAAGT GGCGGCGGGC
GCGGCCGCGA CCGTGCGGAG TTCGGTCGCG CTCGCGAATC CGAAGTTGTG GGGGCCGCCG
CCGACCCAGC AGCCGCATCG CTACGTGGCG GTGACGACCG TGACCCGCGC CGGCCAGCCG
GTGGATGTCT ACGAGACGCC GTTCGGCATT CGGACGCTGC GGTTCGATCC GGCGGCGGGA
ATTTTTGTCA ATGGCGAGCG GATCAAGCTC CAAGGCGTGA ACCAGCACCA CGACCTTGGC
GCGTTGGGCG CGGCCTACAA CGAACGCGCG GCGGAACGGC AGCTGGAGAT GCTGCGTGAG
ATGGGCTGCA ACGCCGTCCG GATGAGCCAC AATCCACCGG CGCCCGAGTT GCTGGAGCTG
ACCGATCGGA TGGGTTTTCT CGTGATCGAC GAGTCGTTCG ATGTCTGGGA GCGCAAGAAG
ACGCCGCTCG ATCACCATCT GATTTTCCCG GACTGGCACG AGCAGGATTT GCGCGCGCTG
ATCCGGCGCG ATCGCAATCA TCCGTCGGTG ATCGTGTGGA GCGTCGGCAA CGAAGTCGGC
GAGCAATACA CGGGCGAGGC CGGAGCGGCG GTGGCGAAGC GGCTCGTCGC CATCGTACAC
GAGGAGGATC CCACGCGGCC GGCGACCAGC GCGATGAACT ACGCCAGCCC CGACATGCCC
CTGCCGGCGG CGCTGGATGT GATCAGCTTG AACTATCAGG GGGAGGGAAT TCGCGACACG
CCGGAGTTCG AAGGCACGGA GCGAATTCGG AAGACGCCGC AGTATCCGGC GTTTCACGCG
CAGTTCCCGC AGAAGGTGAT CCTGACGAGC GAGAGCGCGT CGGCGTTCAG CAGTCGCGGC
GTTTACCTTT TCCCGGTGAC GCCGAAGATC AGCGACGTGG TGCGCGACGG ACGTGGCGGC
GACTCCACGA TTCACCAGGT GAGCGGGTAC GAGCTGCACG CGGTGGATTT CGGCTCCTCG
GCGGACAAGG TCTTCGGTTC GCTGGATCGT CATCCTTACG TGGCGGGCGA GTTCGTGTGG
ACCGGGTGGG ATCATCTGGG GGAACCCACG CCCTATTACA CCTCGCGGAG CGCGTATTGC
GGGATCATCG ACCTGGCGGG GTTCAAGAAA GACCGGTTCT ATCTGTACCA GTCGCGCTGG
CGGCCCGACC TGCCGATGGC GCACCTGCTG CCGCATTGGA CCTGGCCGGA ACGCGTGGGT
CAGGTGACGC CGGTGCACGT GTTCACCTCG GGCGACGAGG CCGAGCTTTT CCTGAACGGG
CAATCGCTCG GTCGGAAGCG CAAGGGCGCG TATGAATACC GGTTGCGCTG GGACGACGTG
GTCTACGCGC CGGGCACGCT CGAAGTCGTT GCCTACAAGG ACGGGAAGAA GTGGGCGACG
GACCGCGTGG TGACGGCGCA GCCGGCGGCC GCGTTGACGG CGGAGCCGGA CCGCGCGGAG
ATCCGGGCGG ATGGCCGGGA TCTGTCGTTC GTCACGGTGC GGGTGGTGGA CGCGGCGGGC
GTGTTGGCGC CGCGGGCGGA CCATCGGATT CGGTTCCAGA TCGCAGGGCC GGGCGAGATT
GTCGCGACCG ACAACGGGGA TCCGACGAGC TTCGAGTCGT TCCAGGCGCC GGAGCGAAAA
GCGTTCAGCG GACAGTGCCT GGTGATCGTC CGCGGGCAGC GCGGCCAGGC GGGGAAGATC
ACAATTACGG CCTCCGGCGA AGGGCTGGAG GAAGCGGTCA CGGTGATCAC CGCGAGGTGA
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| Protein sequence | MTSSLKTGFT FAFVGLLGFF TAQSLPAEQP FAAHGERSSA QLRERLPLND DWRFQKDDPP
GNTVSLDYDV RPVVTTNQDG RAADAEPTEA EKLAAASRVV LKPWILPTGN AFIKDPAPRY
TRPAGDPGSD VAYVRADFDD QAWRRVNLPH DWAIEGPFLT TGDFGGMGRL PSWGIGWYRK
AFDLPAEDAG KSIVLEVDGA MSYATVWLNG HLVGGWPYGY SSWQVNLTPY LAFGGRNQLA
IRLDNPPASS RWYPGGGIYR NVWLTKTQPV HVGQWGTAVT TRDVTSRSAT IELAVTVDND
GREPAPISVS SEIFALDLQG RKTAEVVART EAIETQVAAG AAATVRSSVA LANPKLWGPP
PTQQPHRYVA VTTVTRAGQP VDVYETPFGI RTLRFDPAAG IFVNGERIKL QGVNQHHDLG
ALGAAYNERA AERQLEMLRE MGCNAVRMSH NPPAPELLEL TDRMGFLVID ESFDVWERKK
TPLDHHLIFP DWHEQDLRAL IRRDRNHPSV IVWSVGNEVG EQYTGEAGAA VAKRLVAIVH
EEDPTRPATS AMNYASPDMP LPAALDVISL NYQGEGIRDT PEFEGTERIR KTPQYPAFHA
QFPQKVILTS ESASAFSSRG VYLFPVTPKI SDVVRDGRGG DSTIHQVSGY ELHAVDFGSS
ADKVFGSLDR HPYVAGEFVW TGWDHLGEPT PYYTSRSAYC GIIDLAGFKK DRFYLYQSRW
RPDLPMAHLL PHWTWPERVG QVTPVHVFTS GDEAELFLNG QSLGRKRKGA YEYRLRWDDV
VYAPGTLEVV AYKDGKKWAT DRVVTAQPAA ALTAEPDRAE IRADGRDLSF VTVRVVDAAG
VLAPRADHRI RFQIAGPGEI VATDNGDPTS FESFQAPERK AFSGQCLVIV RGQRGQAGKI
TITASGEGLE EAVTVITAR
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