| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3350 |
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| Symbol | |
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| ID | 6204430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4376557 |
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| End bp | 4379007 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693015 |
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| Product | permease |
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| Protein accession | YP_001820227 |
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| Protein GI | 182415161 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.156293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.62653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCT TCGAATCTGT GCTGCGCGAC GTGCGCTTGT CCCTCCGCAA CCTCGCGCGC
GAAAAAAGTT TCACGGCCAC GGCACTCCTG ATCCTGTCGC TCTGCCTCGC CGCGAACATC
GCGATCTTTG CGGTGGTGAA CAGCGTGCTG CTGAAACCGC TGCCGTTCAC CGCGCCCGAG
CAACTCGTGC TGGTGGCCAA CGCTTATCCC AAGGCGGGTG TGCCGCGCGC CGGAGCCTCC
GTGCCGCATT ACCTCGAGCG CAAGGAGCAA GTCGCCGCGT TCGCCGACGC CGGCGCAGTG
CGCGGCTCCG GGGTAACCAT CGGCGAAGCC GGCTCGCCGG AGCGAGTCGA CGCCACGAGC
GCGACGCCGT CGTTTTTCCG CACGCTCGGG GTGAATGCCG CGCTCGGACG GACGTTCACA
GACGAGGAGG GTTTTTATGG GAAACATTTG GTCGTGATCC TCAGCGACAG CCTGTGGCGG
CAGCGGTTTG GGGCGGATCC CGCGGTGATC GGCCAGAAGA TGCGGATCAA CACGGAGCAG
TTCACGATCG TCGGCGTGAT GCCGCCGTCG TTCCGCTATC TGTCGCAGCG CGCGAAGCTC
TGGACGCCGC TGTGCTTTTC GGACGACGAC CGGAAACAGG ATCGGCGGCA CTCGAACAAC
ATGCAGATGA TCGCGCGGCT GAAGCCGGGC GAATCAGTTG GGACGGCGCA GGCGCAGGTG
GACGCGCTCA ACGCCCGCAC GCTCAAGGAA GATCCCTTTG GCAAGACCGT CATCGATGCC
GGGTTTCATA CGTTCGTGCG CGATCTCGGC CAGGACTACG TGGCGGAACT TCGGCCGGTG
CTGCTGCTGC TGCAGACCGG CGTGTTGTTC CTGCTGCTGA TCGGCGCGGT CAACCTGGCG
AACCTGTTGC TCGTCCGCGC CACCGGCCGC ACCAAGGAAT TCTGTGTCCG GCAGGCCCTC
GGCGCCAGTT GGGGCCAGCT GGCGCGCTCG CTGGTGACCG AGACCGTGGT GCTTTCGGTG
CTCGGCGGTG TGATCGGACT GGCTTTGGGC GCGGCGGCCG TGCGCGGCAT CGTCTTGCTC
GCTGCCGACC AGTTGCCGGT GGCGATCGAT CCCTCGCTGG ATTTCAACGT GTATCTGGCC
GCGCTCGCGG GGACGATCGT GCTCGGCGTG GTGCTCGCCG TGCCGGTGAT CTGGCACACG
TTGCACGGCA ACTTGACCGC GGCATTGTCC GTCGAGTCGC GTGGCGGCAC GACCACGCGT
GCGGTGCACC GGCTGCGGCA TGCGTTGATC GTGGCGCAGA TCGCACTCGC GTTTGTCCTG
CTCGCCGGGA CGGGTCTGCT CGGATTGAGT TTCGCGCGCG TCATGGCGGT GAATCCGGGG
TTTCAGGCCG AGAATGTCCT CACCGGCACG GTCGCGCTGC CGTGGGTGAA CTACAAAGAG
GACAAGCAGC GGCTTGCCTT CATCGATCGA TTGCTGGTGG AGCTGCAGGG CGTGCCCGGC
GTCACTTCCG TCGGGATCGG CACGGGGCTG CCGTTCACCG GTTCGGCCAA CAACAACGCG
ACGTGGATCG AGGGACGCGA ACCGGCGCAG GGCGAATCCC TCCAGGCGCA CTACACGAGC
GGCGTGGCGG GTGACTACTT TCAAACGCTC GGCGTGCCCC TGCGCGAGGG CCGCTATCTC
ACTGCCGCCG ATCTGCACGG CGAAAATCGG GTCTGTGTCA TCGACGAAGA CGTGGCCCGC
CGCTACTGGC CGAAGGCAAG CGCGGTGGGG CACCGGCTCT CGAACGAGCC GCCGGGCAAG
GATCAAAAAC TCTACACGAT CGTCGGTGTC GTGGGCGCGG TGAAGCAGAC CGATCTCGCC
GACGCGCGCG CGAACGGCGC GATCTATTTT CCCTACAACA ACTATGCGAG CACGTGGTTC
GCGCTCACGG TGCGAACGAC GCAGCCCGCC GAGCTGGCCG GCAAGGCCCT GCGCGGTGCC
GTGCTGCGCA TCGACCCCGA ACTGCCCGTG GACGATTTGA AAACGATGGA AACGCGCGTG
GCTGACAGCG TCGCCGGGCG GCGCGTGCCG TTGCTGCTCG CCGGAATCTT CGCGGCCGTC
GCGCTGGTGC TGGCGGCCGT GGGAATCTAC GGCGTGCTGG CTTACACGGT CGCGCAACGG
CAGCGTGAGA TCGGCGTGCG GATGGCGCTC GGGGCGCTGC CGGAGCAGAT CCTGGCGCAG
TTTCTCGGAC TCGGCGGCCG GCTGCTGCTG ATCGGGCTGC CGCTCGGGTT GCTTGGCGCC
TGGTTCGCGG GCCGCGCGAT GAGCGGCATG CTCTTCGGCG TCGCGCCGAG CGACGTGACC
GTGCTCGGCG GCACCGCGGT GGTGCTCTCG CTCGTGGCGG TGCTAGCCTG CCTGATTCCG
TCGCGGCGCG CCGCGCGCGT GACGCCCGTG GAAGCGCTCC GCGCGAACTA G
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| Protein sequence | MPPFESVLRD VRLSLRNLAR EKSFTATALL ILSLCLAANI AIFAVVNSVL LKPLPFTAPE
QLVLVANAYP KAGVPRAGAS VPHYLERKEQ VAAFADAGAV RGSGVTIGEA GSPERVDATS
ATPSFFRTLG VNAALGRTFT DEEGFYGKHL VVILSDSLWR QRFGADPAVI GQKMRINTEQ
FTIVGVMPPS FRYLSQRAKL WTPLCFSDDD RKQDRRHSNN MQMIARLKPG ESVGTAQAQV
DALNARTLKE DPFGKTVIDA GFHTFVRDLG QDYVAELRPV LLLLQTGVLF LLLIGAVNLA
NLLLVRATGR TKEFCVRQAL GASWGQLARS LVTETVVLSV LGGVIGLALG AAAVRGIVLL
AADQLPVAID PSLDFNVYLA ALAGTIVLGV VLAVPVIWHT LHGNLTAALS VESRGGTTTR
AVHRLRHALI VAQIALAFVL LAGTGLLGLS FARVMAVNPG FQAENVLTGT VALPWVNYKE
DKQRLAFIDR LLVELQGVPG VTSVGIGTGL PFTGSANNNA TWIEGREPAQ GESLQAHYTS
GVAGDYFQTL GVPLREGRYL TAADLHGENR VCVIDEDVAR RYWPKASAVG HRLSNEPPGK
DQKLYTIVGV VGAVKQTDLA DARANGAIYF PYNNYASTWF ALTVRTTQPA ELAGKALRGA
VLRIDPELPV DDLKTMETRV ADSVAGRRVP LLLAGIFAAV ALVLAAVGIY GVLAYTVAQR
QREIGVRMAL GALPEQILAQ FLGLGGRLLL IGLPLGLLGA WFAGRAMSGM LFGVAPSDVT
VLGGTAVVLS LVAVLACLIP SRRAARVTPV EALRAN
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