| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3349 |
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| Symbol | |
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| ID | 6204357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4375460 |
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| End bp | 4376323 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693014 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001820226 |
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| Protein GI | 182415160 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.426721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG CTCCTTCGTC CGCATCTGCC TCCATTCCTC CGCCCGTTGT TTCCGATCCG
CCGCGGCGGT TGGAAAAACA AATCGCGCTC GTGACCGGCT CCGGCTCCGG GCTCGGGCGC
GAGATCGCGA TTGAGCTCGC GCGCGCGGGC GCGGCCGTGG TCATCAACTA TGCGCACAGC
GCAAAGAGCG CGGAGCAGAC CGCGAGCGAG ATTCGCGCCG AAGGCGGCCG CGCGCTGGTC
GTCCAAGGCG ATGTGAGTCG CGAAGCGGAC GTGCAGGCGA TGTTCCGTCG CACCTGCGAG
GAGTGTGGCA CCGTCGACAT CCTGGTGAAC AACGCCGGCA TCGAGCAGGA CGTGGCGTTC
GACGAGATGA CGCTCGCGCA GTGGCAGAAG GTCATTGATG TGAATCTCAC CGGGCAGTTC
CTCTGCGCGC GCGAGGCGGT GCGCCAGTTC AAACGCCGCG GCGTGCGGCC GGAGATTTCC
TCGGCGGCGG GCAAGATCAT CTGCATCAGC TCGGTGCACG AGGTGATCCC GTGGGCGGGA
CATGTGAACT ACTGTGCATC CAAGGGTGGG GTGATGCTGA TGATGAAAAG CCTGGCACAG
GAGGTGGCGC GCGATCGGAT TCGCGTGAAC AGCATCGCGC CGGGCGCGAT TCGCACGGAC
ATCAACCGGC ACGCGTGGGA AACGCCGGAG GCGATGCGAC AGCTGCTGAC GATGATCCCG
TATGGCCGGA TCGGCGAACC CGCTGACGTC GGACGGCTCG CGGTGTGGCT CGCCTCGGAT
CAATCGGACT ACATCACCGG CACGACGATC TTCATCGACG GCGGCATGGT GCTGTATCCG
GCATTCTCGA GCGGGAAAGG TTGA
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| Protein sequence | MNNAPSSASA SIPPPVVSDP PRRLEKQIAL VTGSGSGLGR EIAIELARAG AAVVINYAHS
AKSAEQTASE IRAEGGRALV VQGDVSREAD VQAMFRRTCE ECGTVDILVN NAGIEQDVAF
DEMTLAQWQK VIDVNLTGQF LCAREAVRQF KRRGVRPEIS SAAGKIICIS SVHEVIPWAG
HVNYCASKGG VMLMMKSLAQ EVARDRIRVN SIAPGAIRTD INRHAWETPE AMRQLLTMIP
YGRIGEPADV GRLAVWLASD QSDYITGTTI FIDGGMVLYP AFSSGKG
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