| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3274 |
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| Symbol | |
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| ID | 6206797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4288876 |
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| End bp | 4290972 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692940 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001820153 |
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| Protein GI | 182415087 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily
[COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01485] sucrose-6F-phosphate phosphohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.258602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.120543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCAA CCACCCCCCC GCCGATCCGG ATCTTCTCTT CGGATCTCGA CGGCACCTTG
CTCGGCAATC CCGAGTCAAC GCAGCGTTTC AAGCAAACCT GGGAGGCGCT CCCGGCGGGG
AACCGTCCGC TGCTGATCTT CAACAGCGGG CGAACCGTGA AGGACACCCG CGCGTTGGTC
CACGCGCGCA AACTGCCGGA GCCGGACTTC ATCATCGGCG GCGTGGGCAC CGAGTTGTTC
GATCCCAAGA ACCGTCCCGA GCTGGCGGAT TTCGGCGCCC AGTTCGGCGA AGGCTGGGAT
CTCGCGAAGG TCGAGGAGAT CGTTGGTTCC ATGCCGGGCA TTGAGCGCCA GCCGCCGGAG
TTCCTGCATC CCTACAAGTC GAGCTGGTAT TGGCACCGCG TGGATCGCGA AAAAATCCGC
GCGCTGCAGG AGAAGCTGGC CGCGGCGGGG CTGAAGGCGG CGGTGGTGTA TTCGAGCCTG
CGCGATCTCG ACGTGCTCCC AAGCCGGGCG ACGAAGGGCA ACGCGCTCGT CTGGTTGTGC
GAGCGATTGC AGATTCCCCT CGAGCAGGTG CTGGTGGCCG GCGATACCGG CAACGACTCG
AGCATGTTCC TCATTCCGGG CGTGCAGGGC ATCGTGGTGG AGAACGCGCA GCCGGAGTTG
TTCGAAGCGG TGGTAAAGCT GCCCGCGTTC GTCACGCATC AGATCATGGC CGACGGCGTG
TTGGAAGGGT TGAAGCACTT CGGGATCATT CCGGAGGTGC CGCGGCCGCG CAGCCTGCCC
GCGCGCGAAC GGCAGCGGGG GGTGTGGAAG GGGATGCTCT TCGGCCCGGA ATCGCTCCGC
AGCCTGAGCA GCGAGGATCG CGAGCTGATC GCCATCGGCT ACGAGAAAGC GCTGGTGGCG
CTCCACAAGA ACATCACCCC GCTCGGATTC TCCGCGTGTT CGCTGACCGA CAACGCGGTC
ACCGGCACCG ACGTGAACTA TCGCAGCATC TGGGCGCGCG ACGGCTGTTT CACGGTCGTG
CAGACGATCG ACATGGATGA ACCGGAGATC CGCGAGGCGC AGCTGCAGAC GCTGCGCACG
CTGCTTGACG CGATCAGCCC GGCCGGTCAG GTGCCGGCCA ACGTCCGCAT CGAGACGAGG
GAGCCGGAGT ATGCGGGCAT CGGCGGCATC TGCTCGGTGG ACAGCGGACT GTGGCTCATC
AATGCGGTTT ACCATTACGT CACCGTCACC GGTGATCTCG CGCTGCTGGA GGAATACCAG
CCGCGGTTGC AACGGGTGAT GGACTGGCTG TCGGCACAGG ACTCGAACAC CGACGGACTC
ATCGAGGTGC CCGAGGCGGG CGACTGGACG GATCTGTTCG GCCGCAGCTA TCACGTGCTC
TACGACGAGG TGCTGTGGTA TCGCGCGAAT GTCTGCTTTG GCCGGCTGCT GGAATACCGG
CGGGATTTCG ACCGGGCGGC GGATTATCTG CGCTGGTCGC AGCACATCGC GGGAAAGATC
AAGCTCTCCT TCTGGCCGAG CACTGGCGCG GAGCACGCGC AGCGGATCAC GTTCGCGGAT
CGGCAAACCT CGCTGGGCGA CTCGCAGTAC CTCCTGGCCG AGATCACGCC GTTCAGCTTC
AACTGGCGCT GCGACGTGCT GGGCAACATC CTCGCGTTTC TCACCAACGT GATCGACATC
GAGCGCGCGC GCACGGCGTT TCGCTTCATG TGGGGCGTGG GCGTGAACGA TCCCTATCCG
GTGGCCAACC TCTATCCGGC GGTCCAGTCG GGCGATCCCG ACTGGCGGCC GTATTACACG
GTGAATCTGC TGAACCTGCC GCATCACTAC CACAACGGCG GCATCTGGCC GTTCATCGGC
GGCATGTGGG TGCGGTTCAT TCATCGGCTC GGGTTGCAGG ACATCGCGCG CACGGAACTC
GTGAAGCTCG CGCGCGTGAA CCAGCTCGGG AAAATCGAGC CCTGGGAATT CAACGAATGG
GTGCACGGCA CGACCGGCCG GCCGATGGGC AAGGCCTATC AAGCGTGGTC GGCGGCGGCC
TATCTGCGCG CGTGCCAGGA GCTGCACCTC GGCGCCGGGG CTTTGACCGA TGACTGA
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| Protein sequence | MASTTPPPIR IFSSDLDGTL LGNPESTQRF KQTWEALPAG NRPLLIFNSG RTVKDTRALV
HARKLPEPDF IIGGVGTELF DPKNRPELAD FGAQFGEGWD LAKVEEIVGS MPGIERQPPE
FLHPYKSSWY WHRVDREKIR ALQEKLAAAG LKAAVVYSSL RDLDVLPSRA TKGNALVWLC
ERLQIPLEQV LVAGDTGNDS SMFLIPGVQG IVVENAQPEL FEAVVKLPAF VTHQIMADGV
LEGLKHFGII PEVPRPRSLP ARERQRGVWK GMLFGPESLR SLSSEDRELI AIGYEKALVA
LHKNITPLGF SACSLTDNAV TGTDVNYRSI WARDGCFTVV QTIDMDEPEI REAQLQTLRT
LLDAISPAGQ VPANVRIETR EPEYAGIGGI CSVDSGLWLI NAVYHYVTVT GDLALLEEYQ
PRLQRVMDWL SAQDSNTDGL IEVPEAGDWT DLFGRSYHVL YDEVLWYRAN VCFGRLLEYR
RDFDRAADYL RWSQHIAGKI KLSFWPSTGA EHAQRITFAD RQTSLGDSQY LLAEITPFSF
NWRCDVLGNI LAFLTNVIDI ERARTAFRFM WGVGVNDPYP VANLYPAVQS GDPDWRPYYT
VNLLNLPHHY HNGGIWPFIG GMWVRFIHRL GLQDIARTEL VKLARVNQLG KIEPWEFNEW
VHGTTGRPMG KAYQAWSAAA YLRACQELHL GAGALTDD
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