Gene Oter_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3250 
Symbol 
ID6207138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4255807 
End bp4256715 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID641692916 
Productglycosyl transferase family protein 
Protein accessionYP_001820129 
Protein GI182415063 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.253985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.48335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTC CGTTCATCAG CATCTGCATT CCCGCCTATC GCGCCGAGCG GTACCTGCCG 
GCGACGCTCG AATCGGTGCG GGCGCAGAGC TTCACCGACT GGGAACTGAT CGTCACCGAG
GACGGCTCGC GCGATTCGAC CGAGGACATC GTGCGCGAGT TTGCCCGCAC GGTGGAACAG
CCGGTGCGCT ACGACCGGCA CGCCCACAAT CTCGGCCTGC CGGCCACGCG CAACACCGGC
ATCGCCGCCG CGCGCGGCGA ATGGATCGCG CTGCTCGATT CGGATGACGT GTGGACCACC
GCGCACCTGG AAACCGCGGC GACGTTCACC ACCGATGCCT CGATCGAGTT CATCCACTCC
GGTTCGGTGC TGTTCGACAG CGACAGCGGC CGCGAACTCG AGGTCCGCGC GCCGACGCCC
CAGATGATCG GAGACTTTCC GTGCAGCTTG TTCAACGGTA TCTACACGAT CCAGCCCTCG
TCCGTCGTGA TGCGGCGGCG GCTCTGGGAA GATGTCGGCG GCTTTGATCC GACGTTCCGC
TACGTCGAAG ACCGTGAGAT GTGGATCCGC TGCGCCCGCA CCGGCGCGCG TTTCATCTAC
ACGGGACTCA ACACCTGTCT TTATCGCCGG CATGCATCGG CACTGTCGCG TCACGGCGTC
GCCATGGCGC TCGCGAGCGC CCGCGTCTAC GAGAAGAATC TCGACTGGGA AGCAGTGCCG
CGCCGGCTCC GTGAAACCCG CGCGGCCGAT GCCTGGCTGG CCGCCGGCCG CATCGCGCTG
CGCAGCGATC CGGCGTCGGC CCGGAGTTTC TTCAGCCGCT CGCTGCGGCA CCGCGCCCTC
AAACCGGCCG TGTGCGCCTA CTGGCTCGCC GCCGCGGTCA TGAATTTCAC CCGCGTCAAG
GCCGCATGA
 
Protein sequence
MKSPFISICI PAYRAERYLP ATLESVRAQS FTDWELIVTE DGSRDSTEDI VREFARTVEQ 
PVRYDRHAHN LGLPATRNTG IAAARGEWIA LLDSDDVWTT AHLETAATFT TDASIEFIHS
GSVLFDSDSG RELEVRAPTP QMIGDFPCSL FNGIYTIQPS SVVMRRRLWE DVGGFDPTFR
YVEDREMWIR CARTGARFIY TGLNTCLYRR HASALSRHGV AMALASARVY EKNLDWEAVP
RRLRETRAAD AWLAAGRIAL RSDPASARSF FSRSLRHRAL KPAVCAYWLA AAVMNFTRVK
AA