Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3246 |
Symbol | |
ID | 6205485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 4251004 |
End bp | 4252311 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641692912 |
Product | ABC transporter related |
Protein accession | YP_001820125 |
Protein GI | 182415059 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.224686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.539755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCACC CGGCCATTTC CATCCGCAAC ATCTCAAAAA AGTACCGTCT CGGTCTCATC GGCATGACCA CGCTGCGCGA CGAGCTGCAG CGGCGCTGGG CTCGGCTGCG TCGCGACGAT CTCGCGCTGG GCGTAAAGAA CAACGTCCGC AATCGCGGCG CCGAATTCTG GGCCTTGCGC GACATCTCCT TCGACGTCCA GCCCGGCGAG GTCGTGGGCC TCATCGGCCG CAACGGCGCC GGCAAGAGTA CCCTGCTCAA GGTACTCAGC CGGATTACCG AGCCCACGCT CGGCGAAATC CGCTTGCGCG GCCGCGTCGC CAGCCTGCTC GAGGTCGGCA CCGGCTTCCA CCCGGAGCTC AGCGGCCGCG AAAACATTTT CCTCAACGGC GCCGTGCTCG GCATGACGCG CGCCGAGACC CGGCGGAAGT TCGACGAGAT CGTGGAGTTC TCCGAAATCG GCAAGTTCCT CGATACGCCC GTCAAGCGTT ACTCGAGCGG CATGTATGTC CGGCTCGCCT TCGCCGTCGC CGCGCATCTC GATCCCGAGA TCCTGATTGT CGACGAGGTG CTCGCGGTGG GCGACGTCGC CTTCCAGCGC AAGTGCCTCG GCAAGGTGAA GGAGATTTCG CAGGGCCAGC ACCGCACGGT GATCTTCGTC AGCCACAACA TGAACGCGGT GGAGAACATC TGCACCCACG GCGTCATGCT GCGCAACGGC CAACTCGTGC GCGAGGGCAG CGACGTCCGC GACATCATCC GGCAGTATCT CGCCGACGGG CTCAATCCCG ACCAGGAGCC GGTCTGGCAG AACGACACGC ACCAACTGAA GAACGACTAC TGTCGGATCG ATCGCTTCCT GCTCGCCGAT CCGCAGGGCG ACCCGCTGCG CGAAACGGTG CGCAACGACA CCTCCGTGAG CGTGATCATC GAGGGCGAAA TCCTGAAGCC GAATCCGAAC CTCCAGTGCG GCTACGGGCT TTTTAGCGAT GAGATGGACC TGCTCTACAT CAGCACGCAT CTCGACCAGC CGGAATCGGA ATGGGTCGAG CTGCCGCGCG GCTCCTTCCG GCTCACCACG AAAATCCCTC GCCGTTTTCT GAACGAGGGC CGCTATCACG TCGGCTTGTT CTTCGCGTTG AATCGCCGCG AAAAACTCTG CGAGCCCGGC GGCAAGGGCT CGCCGATGCT CACGTTCGAG ATCCGGGGCG GGCTCAGCGA TTCGCCGGCG TTCATGTCGC GGCGCTCGGG TTTCCTCAGT CCGATCTTGG AATGGGAGAC GCGCACCGGC GTCGAGCTGC TGGCCTGA
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Protein sequence | MSHPAISIRN ISKKYRLGLI GMTTLRDELQ RRWARLRRDD LALGVKNNVR NRGAEFWALR DISFDVQPGE VVGLIGRNGA GKSTLLKVLS RITEPTLGEI RLRGRVASLL EVGTGFHPEL SGRENIFLNG AVLGMTRAET RRKFDEIVEF SEIGKFLDTP VKRYSSGMYV RLAFAVAAHL DPEILIVDEV LAVGDVAFQR KCLGKVKEIS QGQHRTVIFV SHNMNAVENI CTHGVMLRNG QLVREGSDVR DIIRQYLADG LNPDQEPVWQ NDTHQLKNDY CRIDRFLLAD PQGDPLRETV RNDTSVSVII EGEILKPNPN LQCGYGLFSD EMDLLYISTH LDQPESEWVE LPRGSFRLTT KIPRRFLNEG RYHVGLFFAL NRREKLCEPG GKGSPMLTFE IRGGLSDSPA FMSRRSGFLS PILEWETRTG VELLA
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