Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3191 |
Symbol | |
ID | 6206512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4148487 |
End bp | 4149380 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692858 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001820071 |
Protein GI | 182415005 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0102406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC GTCCGCTCAC TGGCACGATC ACCGCGCTTG TCACGCCCTT CCGCAAGGGG GCCGTCGCAT TTGACGACCT GGAGAAACTG GTCGCGTTTC AAATCAAAGG CGGAATCGAC GGCCTGGTGC CGGTCGGCAC GACCGGCGAA TCGCCGACGT TGAGCCACGA GGAGCACATG GACGTGGTGC GGGCGGTGAT CGCCGCGGCG CGGAAGCGCG TGCCGGTGCT CGCCGGCACC GGCTCGAACT CGACGCACGA AGCCGTCGAA CTCACCAAGC TGGCGCATGA CGCGGGAGCC GATGCGATGC TCGTGGTTGC GCCCTACTAC AACAAGCCGA GCCAGGAGGG GCTTTTCCAA CATTACTGTG CGATCGCGGA TGTCACCGAC CGGCCGATCG TGCTCTACTC CATTCCCGGA CGCTGCGGCA TAGAGATCGG TGTGCCGGTC GTGGAGCGAC TCGTGCGTCG CTACCGACAC GTGCGCTGGA TCAAGGAGGC CGGCGGCAGC GTTGATCGCG TCGATCAGCT GAAGCAGGCG CTGGGTTCGG ACATCACGGT GTTGAGCGGC GACGATTCGC TGACCCTCCC CTTCCTGGCC GTCGGCGCGG AAGGCGTGAT CAGCGTCGCC TCGAACCTGT TCGTGCGCGA GGTGAGCCGA ATGGTGCAGT TCGCGCGAGC CGACGAGTTT GCGAAGGCCG CGAAGGTGCA CCGGCAGCTG TATCCATTGT TCAAGGCGCT GTTCATCGAG CCGAACCCCG CGCCGATCAA GGTCGCGCTC GCCCGCGCCG GCGTGATCGG ATCTGACGAG GTGCGGCCGC CGCTCGCGCT GATGAGCGCC GCCAATCTTG CCGTGCTGAC CAAGGCGCTC GCCGGTCTCG GACTGCGTCG TTGA
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Protein sequence | MKQRPLTGTI TALVTPFRKG AVAFDDLEKL VAFQIKGGID GLVPVGTTGE SPTLSHEEHM DVVRAVIAAA RKRVPVLAGT GSNSTHEAVE LTKLAHDAGA DAMLVVAPYY NKPSQEGLFQ HYCAIADVTD RPIVLYSIPG RCGIEIGVPV VERLVRRYRH VRWIKEAGGS VDRVDQLKQA LGSDITVLSG DDSLTLPFLA VGAEGVISVA SNLFVREVSR MVQFARADEF AKAAKVHRQL YPLFKALFIE PNPAPIKVAL ARAGVIGSDE VRPPLALMSA ANLAVLTKAL AGLGLRR
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