| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3144 |
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| Symbol | |
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| ID | 6205329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4086432 |
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| End bp | 4087013 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692810 |
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| Product | DNA-3-methyladenine glycosylase |
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| Protein accession | YP_001820024 |
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| Protein GI | 182414958 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00878539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.470137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGGA TCATTGACGC AGCAGAGCTG AAGACCCGCG GCGCCGTCGC GTGCGCCCGC
TGGCTGCTCG GAAAGTATCT CGTGCGTCAA CGTGCGGACG GCTCGACCGA AGCGCGCATG
ATCACCGAGA CCGAGGCCTA CAACGGAGAG CGCGATCTGG CGTGCCATGC GCGCGCGGGC
CGGACGGCGC GAACCGCGGT GCTCTACGAG CCAGCGGGCG TGTGGTATGT TTACCTCTGC
TATGGGATCC ACGAGATGCT CAACCTCGTC GCCGGGCCGG AGGACTGGCC GGCGGCCGTG
TTGATCCGCG GGGTGGAAGG CGTGGCCGGC CCCGGGCGCG TGACGAAACA CCTCGCCGTC
GACCGGCGGC TGAACCGGCA ACCGGCCGCC GAGGCGAGCG GACTCTGGGT CGAGGACCGC
GGCGTGCGCG TGCCGCGCCA CCTGATCCAG ATCACGCCGC GAATTGGCGT GAACTACGCG
GGTGAGATCT GGGCGAAGAA ACCGTGGCGG TTCGTGATCA GCGATCCGGC GGCGGTGCGG
CGGCGCATAG CCGAACGCGT GAGGATTTCA ACGAAAGGCT GA
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| Protein sequence | MNRIIDAAEL KTRGAVACAR WLLGKYLVRQ RADGSTEARM ITETEAYNGE RDLACHARAG
RTARTAVLYE PAGVWYVYLC YGIHEMLNLV AGPEDWPAAV LIRGVEGVAG PGRVTKHLAV
DRRLNRQPAA EASGLWVEDR GVRVPRHLIQ ITPRIGVNYA GEIWAKKPWR FVISDPAAVR
RRIAERVRIS TKG
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