| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3004 |
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| Symbol | |
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| ID | 6204298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3859141 |
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| End bp | 3862530 |
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| Gene Length | 3390 bp |
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| Protein Length | 1129 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641692669 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001819885 |
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| Protein GI | 182414819 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.385036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0400425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG GTTCGCAGTT TTCGTTTCTC CAGTCCGAGT GGCCAGAGGT TTTCGAGGCG
GCGGCAAAGG CGGAAGCGCT GGCACTGGTC GATCCGCGGA CCGCGTGCTT CTACGCCCGG
CGGGCGCTGG AGATCGGGGT CACGTGGCTC TACACGAACG ACGACGCGCT GAAACTGCCG
TATCAACAGA ACCTGAGCGC GCTGATTCAC GAGCCCACGT TCAAGACCGC AGCCGGCCCG
GCGGTCTTCA ACAAGGCGGT GCTGATCACG CGCTACGGGA ACCAGGCGGT GCACAGCCAC
CGCGCGGTGA AGGCGTTCGA CGCGCTGACC ACGGTGCGCG AGCTGTTCCA CATCTGTTTC
TGGCTGACCC GAACCTACGC CCGCGGCGCC CGGCCCGCGG ACGACCTCGC GTTTGAACCG
GACACCTTGC CGAAGTCGGC GCCGGTGCCG ACGCAGACGC AGGAACAGTT GCAGAAACTC
GCGGCGCAAC TCGCCGAGAA GGACAAACGG CTCGCAGCGC TGTTTGCGGA CAAGGAAACG
CTGAGCAAAG AGCTGGCACA GGCGCGGCAG GAGATCGCCG CCATCAAAAA GCGCAACGCC
GCGACGCCGG ATCAGCACGA CTACTCCGAG GCACAAACCC GCGATGCGTT CATCGACCTG
CTGCTCAAGG AAGCCGGTTG GCCGCTGAAT CAGCCCCGCG ACCGGGAGGT CGAGGTCAGC
GGGATGCCGA ATCAGCAGAA GAAGGGCTAT GTCGACTACG TGCTGTGGGG CGACGACGGC
CGACCGCTCG CGGTCGTGGA GGCGAAGCGC ACGCGAAAAA GTGCCGCGAT CGGCCAACAG
CAGGCGAAGC TTTACGCCGA CTGTCTGGAG CAGCAGTTCG GACGGCGGCC GGTCATCTTC
TGCTCGAACG GCTATGAGCA CTGGCTGTGG GATGACGCGC TGTATCCGCC GCGGCCGGTC
CAGGGTTTTC GCAAGAAGGA CGAACTGGAG CTGATGATCC TGCGGCGGCA AACGCGCACC
TCCTTGGCTG GAGCCGCGAT CAATCCGGCG ATTGTCGAAC GCTACTATCA GACCCGCGCG
ATCCGCCGAA TCGGCGAGGC ATTCGAGGCC GACTGCGAAC GAAAGGCGCT CGTCGTCATG
GCCACCGGCG CCGGAAAGAC GCGGACGGTG ATCGCGCTGT GCGACCTGTT GATGCGATGC
AACTGGGTGA AACGGGTGTT GTTTCTCGCC GACCGCACCG CGCTCGTGAA CCAGGCGGTG
AACGCGTTCA AGCGTTTCCT GCCGGAAGCG TCACCAGTGA ATCTGGTGAC GGAACCGGAG
GCGGCGGGCC GCGTGTTTGT CTCCACCTAC CCGACGATGA TGGGGCTGAT CGATGAGACG
AAGGACGGCC AGCGGCGCTT CGGCACCGGG CATTTCGATC TGGTCATCAT CGACGAGGCC
CATCGGTCGG TTTACCAAAA ATACGGTGCG ATCTTCCGCT ATTTCGACTC GCTGCTCGTC
GGCCTGACGG CCACACCGCG GGAGGAAATC GATCGCGACA CCTACGGGCT GTTCGACCTG
GAGAAAGGCG TGCCAACGGA TGCCTACGAC CTGAAGAACG CGGTGGCGGA CAAGTTCCTC
GTGCCGGCCA AAGCCGTGTC GGTCCCGCTG AAGTTCCAGC GCGATGGGAT CAAATATGAG
GACCTGTCCG AGGAGGAGAA GGAACAGTGG GACGGGGTCG AGTGGGACGA GGAAGGCACC
ACTCCGCAGA GGGTCGAACC GGAGGCGGTC AACAAATGGC TCTTCAACAA GGACACGGTC
GACAAGGTGC TGGAGCACCT GATGACGCAT GGTCAAACCG TCGCCGGCGG TGACCGGTTG
GGAAAGACGA TCGTGTTCGC CAAGAACAAG GATCATGCCG AGTTCATCGC TCAGCGCTTT
GACGTGAACT ACCCGCACCT CAAGGGCGCG TTTGCCCGGG TGATTCACTG CGGGCTGCCC
TATGCGCAAT CGCTGATCGA TGACTTCTCC AATCCCGCGA AGATGCCGCA CATCGCGATC
TCGGTCGACA TGCTGGACAC CGGCATCGAT GTGCCGGAGG TCGTCAATCT CGTCTTCTTC
AAACTGGTCC GATCGAAAAC GAAGTTCTGG CAGATGATCG GTCGCGGCAC CCGGCTGTGT
CCGGATCTAT TCGGTCCGGG CAAACACAAG GCCTTCTTCT ACATCTTCGA TTATTGTCAG
AACCTCGAGT TCTTCAGCCA GCACCCCGAG ACGACCGCCG GTGCTTTGGG CGCGTCGCTA
AGCAAGCGCA TCTTCACGGC GCGGCTGGAA GTCATCGGCG AACTCGACCG AGCCTTCGCC
GGAATGTCGC ACGAGCCCGC GGAAGGCGAA GCCGAACTCG GCCACGAGCT GCGCGCGGTT
CTGCAGACCG AAGTGGCGGC GATGAACGTC GACAATTTCG TCGTCCGTCC GCAGCGACGG
CTCGTCGAGC GGTTCGCCAA GCCCGAGGCC TGGGTCGCAA TGGATTCCGC GGCTCGAGGC
GAACTGGCCT ATCATGTGGC CGGTTTGCCG ACGGAGCTGG ACCCGGAGGA GGAGGAAGCA
AAACGGTTCG ATCTGCTGAT CCTGAACCTT CAGCTCGCCG TGTTGCGGAA CGCGCGGGAG
TTCGAACGTC TCAAAAATCA GGTGATCGCG ATCGCCGGCC TGCTGGAGGA GAAGGCGGCC
ATCCCGATGA TCCAGGCGCA ACTAGCCCGT ATTCTGGAAG TGCAGACGGA GGGATGGTGG
ACCGACGTGA CGCTCCCGAT GCTCGAGCAG ACGCGCAAAC GCCTGCGCTC GCTGGTCAAG
CTCATCGACA AACGGCAGCG CAAACCGATC TACACGGACT TCGAGGACTC AATGGCGGCG
GCCAAGGAGG TCGTCCTCGC AGATTTCGTC ACCGCGGAAA ACTTCGAGAA GTTCCGCGAG
AAGGTGCGGG CGTTTTTGCG CGCGCATCAG AGCCACCTCA CGATCCAGAA GCTGCGGATG
AATGAACCAC TGACCGCCGT AGATCTCGCG GAGCTGGAGC GGGTGCTGGC CGAAAGCGGC
GTCGCCACTC CCGAACAGTG GGAAACGGCC AAGGCAGCCA GCGACGGTCT GGGGCTTTTC
GTGCGCTCGC TCGTCGGGCT GGATCGCGAA GCCGCGAAGC AGGCGTTGAA CGCCTTCACG
GCCGGGAAGA TCCTCACGGC CAACCAACTC GAGTTCGTGA ACATGGTGGT GGATCAGTTG
ACCGAACGAG GCGTGGTCGA GCCGAAATTG CTCTATGAAT CTCCATTCAC CGACGTAAAC
GCGCAGGGAC CGGACGGGGT ATTCGATTCG AGTCAGGTGG ACGAGTTGCT CGCGCTGCTC
GAGCAAGTTC GCGAACGGGC AGTCGTCTGA
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| Protein sequence | MSAGSQFSFL QSEWPEVFEA AAKAEALALV DPRTACFYAR RALEIGVTWL YTNDDALKLP
YQQNLSALIH EPTFKTAAGP AVFNKAVLIT RYGNQAVHSH RAVKAFDALT TVRELFHICF
WLTRTYARGA RPADDLAFEP DTLPKSAPVP TQTQEQLQKL AAQLAEKDKR LAALFADKET
LSKELAQARQ EIAAIKKRNA ATPDQHDYSE AQTRDAFIDL LLKEAGWPLN QPRDREVEVS
GMPNQQKKGY VDYVLWGDDG RPLAVVEAKR TRKSAAIGQQ QAKLYADCLE QQFGRRPVIF
CSNGYEHWLW DDALYPPRPV QGFRKKDELE LMILRRQTRT SLAGAAINPA IVERYYQTRA
IRRIGEAFEA DCERKALVVM ATGAGKTRTV IALCDLLMRC NWVKRVLFLA DRTALVNQAV
NAFKRFLPEA SPVNLVTEPE AAGRVFVSTY PTMMGLIDET KDGQRRFGTG HFDLVIIDEA
HRSVYQKYGA IFRYFDSLLV GLTATPREEI DRDTYGLFDL EKGVPTDAYD LKNAVADKFL
VPAKAVSVPL KFQRDGIKYE DLSEEEKEQW DGVEWDEEGT TPQRVEPEAV NKWLFNKDTV
DKVLEHLMTH GQTVAGGDRL GKTIVFAKNK DHAEFIAQRF DVNYPHLKGA FARVIHCGLP
YAQSLIDDFS NPAKMPHIAI SVDMLDTGID VPEVVNLVFF KLVRSKTKFW QMIGRGTRLC
PDLFGPGKHK AFFYIFDYCQ NLEFFSQHPE TTAGALGASL SKRIFTARLE VIGELDRAFA
GMSHEPAEGE AELGHELRAV LQTEVAAMNV DNFVVRPQRR LVERFAKPEA WVAMDSAARG
ELAYHVAGLP TELDPEEEEA KRFDLLILNL QLAVLRNARE FERLKNQVIA IAGLLEEKAA
IPMIQAQLAR ILEVQTEGWW TDVTLPMLEQ TRKRLRSLVK LIDKRQRKPI YTDFEDSMAA
AKEVVLADFV TAENFEKFRE KVRAFLRAHQ SHLTIQKLRM NEPLTAVDLA ELERVLAESG
VATPEQWETA KAASDGLGLF VRSLVGLDRE AAKQALNAFT AGKILTANQL EFVNMVVDQL
TERGVVEPKL LYESPFTDVN AQGPDGVFDS SQVDELLALL EQVRERAVV
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