| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2998 |
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| Symbol | |
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| ID | 6204275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3849313 |
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| End bp | 3852132 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692663 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001819879 |
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| Protein GI | 182414813 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.535221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.170765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAC TTGTCATCGC CGAGAAGCCG TCCGTCGCTG CCGACCTGGC GCGCGCCCTC
GGCAAAATTC CCAAGCAGGG CGATCACTAC GAGAACGACC AGTACGTCGT CTCGTATGCG
GTCGGCCACC TGGTGGAATT GGAAATGCCG GAGGACATCG ACAAGAAGAA ATACGGCTTC
TGGCGGCTCG AGACGCTGCC GATCATCCCC GAGAAATTTG GTCTGAAACC GATCGAGGAA
TCCAAGGACC GGTTCAACGC GCTGAAAAAG CTGCTCGCGC GAAAGGACAT CGAGCTGGTC
ATCAACGCCT GTGACGCCGG TCGCGAGGGC GAACTGATTT TCGCGTATCT CTATCAGCTC
ACCAAGTGCA AGCTGCCGGT GAAGCGCGCG TGGATGCAGA CGATGACCGC CGAGGGCATC
CGCGAGGCGT TCGCGCATCT GCGCGACGGC GAGCAGATGG CCGGGCTCGC CGCCGCGGCG
CGCTGCCGCA GTGAGAGCGA CTGGCTCATC GGCATCAACG GCACGCGCGC GCTCACCAAG
CGCATGTTCG GCTCGCGCGC CGGCAACGTG GCGTCCGTCG GCCGCGTACA AACGCCGACG
CTGGCGATCG TCTACTCCCG CGAACTCGAA ATCCGCAATT TCAAGCCTCG CGCCTATTGG
CAGATCACGG CGACTTTCGA AGTCACCAAC GGCCGCTACG AAGGCACCTA TCAGCGCCCG
GACTTCAAGA AGTCCGACGC CGACGAGCAC GATCGCGTCG ACCGGATCTG GGAGCAGGCC
GTTGCGGAAG CGATCGTCGC CGCCTGCCAG GGCCAGCCGC CCGCCGCCGT GCGGGAGGAG
AAGAAGGCCA GCACGCAGAT CGCGCCGCGG CTTTACGACC TCACCACGCT GCAGCGCGAG
GCGAACAACC GCTTCGGACT CTCTGCGCGC CGCACCCTGC AGATCGCGCA AGCGCTCTAC
GAGCGGCACA AGATGATCAC GTATCCGCGC ACTGACTCGC GCGCGCTGCC GGAGGATTAC
ATTCCCACCG TGCGGGAAAC GTTGAAGAAC CTGCACGGCC CGCTCGCGCC CCACGCACAG
CAGGTGCTCG ATCAGGGCTG GGTCCGGCCC AACCGCCGCA TCTTCAACAA CGCGCAGATC
TCTGACCACT TCGCGATCAT TCCCACCGCC CACGAGGCCA AGCACCTCGA CGAGATGGAA
GCGAAGGTGT TCGACATGAT CGCGCGGCGT TTCGTCGCGG CGTTCTTCCC CCCGGCGGAG
TTCGATATCA CCACGCGCAT CAGCACCGTC GCAGGTCGGC ACGAATTCAA GACCGAGGGC
AAGGTGCTGA CCGTCCCCGG CTGGCTCGCG GTCTATGGCC GCACGACGGT CGAGGACGAT
GCCCCCGGCT CGAAATCGCT GCCTGCGCTC AGCGACGCCG ATCGCGCAAC GGTCGCACGC
GGCGACGACG CTCCCGCGCA GGCGAAGACG CTCGATCCCG TGCTGCACGC GGAAACCACC
AAGCCGCCGC CGCGCTACAC GGAGGCCACC CTGCTCTCCG CGATGGAAGG CGCCGGCAAG
CTCGTCGACG ACGAGGATCT CGCCGAAGCA ATGAAGGAAC GCGGGCTCGG CACGCCCGCC
ACGCGCGCCG ACACGATCGA CGGGCTGATC AATCAGAAAT ACATGGAGCG CGGCCAGCGC
GAGTTGATCC CGACCGCGAA AGCGGAGCAA CTGCTGCAGT TCCTCAGTGC GGTGCACACG
GACGCGCTAA CCAGCCCTGC GATGACCGGC GAGTGGGAGT TCAAGCTGCG CCAGATCGAG
CACGGCAAAT TCTCCCGCGA AGAGTTCATG CAGGAAGTGG TCGAGCAGAC CAAAGGCATC
GTCGACCGCG TGAAGAACTT CGAGGAGGAC GACTCCGCGG CCCGCGAAAC CGACATCCCC
TCGCCCACCG ACAATAAACC CCTGCGCGAA ACGCTGCGCG GCTACAAATC GCACGACGGC
GAGTTCATGG TCTACAAGGT CATCGGTGGC CGCAAAATGG AGGAGCCCGA GATCCGCGAG
CTGGTTACCA CCGGCAAGAT CGGGCCGCTC GATGGCTTCC TTTCCGCCAA GACGCACAAG
CGTTTCTCCG CCGTGTTGCG GCTGGTGAAG GACGAGGAGA AGGGCAAGTG GAAGACCGAG
TATGATTTTG GCGACAAGGT CGACCTCGGC ACCGTCGAGC CGTTCTGGAC CGACCCGAAG
ACCGGCGTCC AGCTTTGCGA GGTCGGCTCC AGCTACGTGC TGCGCGAGCG CGACGGCGAA
GGCTGGAAGC AGGCGTTCCG CGTCGGCCGG CTCATGTGCC AGAAGCCGAT CACGCGGGAG
CACGCCATCC AGCTCGTCGA ACAGGGCAAG ACCGAGCTGA TCACCGCGTT TATCTCGAAA
AAGGGCCGGC CCTTCGACGC GTATCTCAAG CGCGATGGCG CCAAGATTAC GTGGGAATTT
CCGCCGCGTG CGCCGAAGCT CGACAAGGAC GGCAAGCCAA TCGTCCGCAA GGCCAAGGCG
CCGCCGGACC TGTCCAAGGC CAAGGTGCTC GGTCAGACGA AGGCGCTCAA TGGTGAGATT
CTCGAAGCCG GCGACTCCTA TTACGTGCGC CGGCCGGATC AGGACAACCG GATCGTCTTC
ACGATGAAAC GGCACGTCTG CCAGAAGGAG ATTCCGCCCG GCGAGCTGCA CAATCTGCTC
GAGAACGGCC GCACGAATCT GATCGAGAAC TTCGTCTCGA AGCGAAACAC GCACTTCAAC
GCTTACCTCG TGCTTTCGAA AAATCGCACG AAGGCCGAGT TCGAGTTTCC GCCGCGGTGA
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| Protein sequence | MKSLVIAEKP SVAADLARAL GKIPKQGDHY ENDQYVVSYA VGHLVELEMP EDIDKKKYGF
WRLETLPIIP EKFGLKPIEE SKDRFNALKK LLARKDIELV INACDAGREG ELIFAYLYQL
TKCKLPVKRA WMQTMTAEGI REAFAHLRDG EQMAGLAAAA RCRSESDWLI GINGTRALTK
RMFGSRAGNV ASVGRVQTPT LAIVYSRELE IRNFKPRAYW QITATFEVTN GRYEGTYQRP
DFKKSDADEH DRVDRIWEQA VAEAIVAACQ GQPPAAVREE KKASTQIAPR LYDLTTLQRE
ANNRFGLSAR RTLQIAQALY ERHKMITYPR TDSRALPEDY IPTVRETLKN LHGPLAPHAQ
QVLDQGWVRP NRRIFNNAQI SDHFAIIPTA HEAKHLDEME AKVFDMIARR FVAAFFPPAE
FDITTRISTV AGRHEFKTEG KVLTVPGWLA VYGRTTVEDD APGSKSLPAL SDADRATVAR
GDDAPAQAKT LDPVLHAETT KPPPRYTEAT LLSAMEGAGK LVDDEDLAEA MKERGLGTPA
TRADTIDGLI NQKYMERGQR ELIPTAKAEQ LLQFLSAVHT DALTSPAMTG EWEFKLRQIE
HGKFSREEFM QEVVEQTKGI VDRVKNFEED DSAARETDIP SPTDNKPLRE TLRGYKSHDG
EFMVYKVIGG RKMEEPEIRE LVTTGKIGPL DGFLSAKTHK RFSAVLRLVK DEEKGKWKTE
YDFGDKVDLG TVEPFWTDPK TGVQLCEVGS SYVLRERDGE GWKQAFRVGR LMCQKPITRE
HAIQLVEQGK TELITAFISK KGRPFDAYLK RDGAKITWEF PPRAPKLDKD GKPIVRKAKA
PPDLSKAKVL GQTKALNGEI LEAGDSYYVR RPDQDNRIVF TMKRHVCQKE IPPGELHNLL
ENGRTNLIEN FVSKRNTHFN AYLVLSKNRT KAEFEFPPR
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