Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2946 |
Symbol | |
ID | 6204293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3777403 |
End bp | 3779115 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692611 |
Product | hypothetical protein |
Protein accession | YP_001819827 |
Protein GI | 182414761 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.548998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCCG CCCTGTTCAC CTTCTCGCTC GCGTTCGCCC TCAGCGCCTT CGCCGCCACG CCGCGCGTCG AATTCGCCGC GTCGGCCGAC CGCGTCGGCT GCTATGACTT CGTCGAGGTG ACGTTGCACG TTGCTCAGCC CACCGGCGGC AACCCGTTCA CCGACGTCAC CGTCGCAGGC ACCTTCGGCC TGTCCGGCGA GACTCCAATC GCCGTTGACG GATTCTGCGA TTCGGCCGAC GGCCGCGTTT TCCGGATCCG TTTCATGCCG GCGAAGCCGG GCGCGTACGA CTACACCGTG ACCTACCGCG AGGGCGGCTT CGCGCAGCAG CACCGCGGTC AATTCCAAGC CGTCGACCAG CGCAACCGCG GCCTCGTCCG GCTCGATCCC GAATACCCGA GTCACTTCCA GTGGGAAGGC ACCCAGGAGC GCTTTTTCTG GAACGGCACC ACCGCCTACT TCCTCGCCGG TTGGGACGAC GCCACGATCC GCGACGCGAT CGAGCGGCTC GATCTCCACA AGATCACGCG TATCCGCGCG GCGCTGGCCG GCCGGGTCGC GGATGGCCGT ACGTGGTTCG AGCCCGTGGA GCCTTCGGAC AAGTTCACTT TTCGGCTCGA ACCGTGGGTC GCCGCGAACT CCGCGAGCCT CGAGCAGCCC GGCTTCGACG TGAGCAGGTT CAACGTCGGC TACTGGCAGA AATGGGAAAA GCTCCTCGCC GAAACGCGCG CCCGGGACAT GGCGGTTTCC GTCGTGTTCT ACGTCGATGG CAGCCGCCCC GGCGTCGATC CGTTCGGCAA GTCCGGCATG GGCGGCGTGG ACGAGCAGCG CTACTATCGC TACGCCATCG CCCGCTTCGG CGCCTACGCC AATGTGATGT GGGACCTGGC CAACGAGTAT CGGCTGTTCC GGGACGACGC GTGGGCGGAG AGGATGGGCG CATTCGTGAA ACAGGCGGAC CCTTACGATC ACCTGACATC GACCCACGGC CACGATGATT TCCGTTTCAG GAAATCGCCG TGGGCCGATT TTGCGCTGCA TCAGTCCTGG GACGAACACG GCGGCTATGA CTTCATGCTC AAAAACCGCC GCGAACAGGA GCAGACCGGC CGCGTGATCC CGCAGATCAA CGAGGAATAC GGCTACGAGG ATCACTATCC GCAGGGCTGG GGCGAGAGCC GCACCGCGCC TGCCCGCTCC GCTGAAACCC GCGCCCGACT CGCGTGGGAA ATCTGCCTCG CCGGCGGCTA TCAGACCACC GGCGAACGCG CCAACAGCGA GCACGGCGGC GGCTGGCTCA ACGGCCGCGG CGATGATTCG ATGACGATGC TCGAGCGCTA CGGGCACCTC TACGACTTTT TCACCGGCAT CCGTTGGTGG GAGTTGGAGC CGGCGGTCGA GTTGGTTTCA GGCGTGGTGC CGCATCCGAA GGCGCCAGCC CACGCTGCGC CGCGTGTGTT TGCCGCGCGC AATCCGAACG GCGACCTCGC CGCGATCTAC GTGCGCGACG GCGGGATCGT CACGATCAAG AGCGATCTCC TGAAGGATCA GCTCAAGCCG CTCTGGTTCA GCCCGCGCGA TGGCGGCATG CGCAACGCGC GTATGCTCCG CGCCGGCGGT TATCGCACGC CCACCGCCGA GGATTGGGTG CTGCTGTTCC GCACGCCGTG CAACTGCTCG TTTCGCGACT TCGGAAACGA GTTCGAGCCA TGA
|
Protein sequence | MKPALFTFSL AFALSAFAAT PRVEFAASAD RVGCYDFVEV TLHVAQPTGG NPFTDVTVAG TFGLSGETPI AVDGFCDSAD GRVFRIRFMP AKPGAYDYTV TYREGGFAQQ HRGQFQAVDQ RNRGLVRLDP EYPSHFQWEG TQERFFWNGT TAYFLAGWDD ATIRDAIERL DLHKITRIRA ALAGRVADGR TWFEPVEPSD KFTFRLEPWV AANSASLEQP GFDVSRFNVG YWQKWEKLLA ETRARDMAVS VVFYVDGSRP GVDPFGKSGM GGVDEQRYYR YAIARFGAYA NVMWDLANEY RLFRDDAWAE RMGAFVKQAD PYDHLTSTHG HDDFRFRKSP WADFALHQSW DEHGGYDFML KNRREQEQTG RVIPQINEEY GYEDHYPQGW GESRTAPARS AETRARLAWE ICLAGGYQTT GERANSEHGG GWLNGRGDDS MTMLERYGHL YDFFTGIRWW ELEPAVELVS GVVPHPKAPA HAAPRVFAAR NPNGDLAAIY VRDGGIVTIK SDLLKDQLKP LWFSPRDGGM RNARMLRAGG YRTPTAEDWV LLFRTPCNCS FRDFGNEFEP
|
| |