| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2930 |
|---|
| Symbol | |
|---|
| ID | 6206549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3752744 |
|---|
| End bp | 3753214 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641692595 |
|---|
| Product | Ferritin Dps family protein |
|---|
| Protein accession | YP_001819811 |
|---|
| Protein GI | 182414745 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
|---|
| TIGRFAM ID | [TIGR00754] bacterioferritin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00884055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAT CGAACGAGAC GATCAGCCGC GAGGAACTGG TGCGGCTGTT GAACGAGGAT
CTGGCCCGCG AGTATCAGGC GATCATCGCC TACGTCGTCT ACAGCCAGAC GATTAAGGGC
GCCGAGTTCC TGCACATCGC CGCCGAGCTC GAGCGCCACG CCAGCGAGGA GTTGGAGCAC
GCGCTGACGA TTGCCAAGCA GATCGACTAC CTGAATGGTT CGCCGGTCGC CACGCCCAAG
GAGGTGAAGC GTTCGGACGA CGCGAGGGAA ATGCTTCGCT TCGACCTCGA AAACGAACGC
GTGACGATCG TGAACTACCG CGAACGAATT CGTCAGGCCG AAGCGCTGGG GGAATTCGCT
CTAAGCGAGG TGCTGCGCGA AATCATCGCG CAGGAACAGG AGCATCTCAC CGACCTCGCG
GACGCGCTGG GGATTGATAC TCCGCCCCTG GACGAACGCG TCGCCGGCTG A
|
|---|
| Protein sequence | MMKSNETISR EELVRLLNED LAREYQAIIA YVVYSQTIKG AEFLHIAAEL ERHASEELEH
ALTIAKQIDY LNGSPVATPK EVKRSDDARE MLRFDLENER VTIVNYRERI RQAEALGEFA
LSEVLREIIA QEQEHLTDLA DALGIDTPPL DERVAG
|
|---|
| |