| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2907 |
|---|
| Symbol | |
|---|
| ID | 6208637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3716066 |
|---|
| End bp | 3717457 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692572 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_001819788 |
|---|
| Protein GI | 182414722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTG AGCGACTGAC TCGTGCCGTG CTGGCGGCTC TCGCGCTGTG GGTCGCGGCG
CCTGCCGCTA CCGGCGACAA TCCGGAGCAG CTGCCGGAGC CGGTGATCGA GTCGGCGGCA
CGCGCGCATG CCATGCTGAC GCGGCTTTGC GACGATTTCG GCGGACGATT GACGGGCACG
CCGCCGGCGC AGGCGGCGCT CGCGCGGCTC GCGTTGGAAC TGCGTGCGCT TGGGCTCGAA
CCCAAGCTGC GCTCTTTTTC GATGCCTGGC TGGGAGCGAG GCGATGATCG GGTGGAACTG
CTGACGCCGG TTCCTCGCAA ACTCCGCGCC GCGGCGTTCG GCTACGTGCA GCCGCACCCA
GCGTTTGAGG CGGATCTCGT GAACCTCGGT GCGGCCAGCG AAAAGGAGTG GCCGGTTGGA
TCAATCGCGG GCGCGGTGGG GTTGATCACG TCGAGTTCGT CAGCCTCCCT GCGCGCGACA
GTGGAACTCG CTCAGGTGCG GGGACTGCGC GGGCTGCTCT ACGGCGGGCG GGAATCGGGC
GGGCAATTGC TCCTGCGCAC GGGCAGTCAC GTGGGCGAGC CGCTGCCTGT CCCCGTCTAC
GCGCTGACCG ACGAGGAGGC GCGCTGGTGC GCACGAAGGC TGCAGCGCGG TGAACCGATG
CGTGTGCGCC TCGAAACGCG CTCGCGCTGC CGCACCGTCG AAACGGCGAA TCTGTCGGTG
ACGCTCAAGG GCCGGGCGCC GGAGCGAATC GTGGTGGGAG CGCACTTCGA CAGCTGGGAC
ATCGGGCAGG GGGCGATCGA CAACGGACTC GGGGTGGCGC AGCTGTTCGC GCTGGCCGAT
GCGTTGCGCG AGCGGAAGCT CGAGCGCACG GTCGAGCTGA TCTGGTTCAA CGGTGAGGAG
CAGGGGCTGT GGGGATCGCG GGAGCAGGCG GCGCGGCTCG GTGACACCCC TATCATCGCG
ATGATCAATC TCGACATGGT GGGCGTGCCG CAGGCCGTAA ATGCATTGGG CGACGAAAGT
CTCGTACCCT GGCTGGAGCA GTGGAACGCG CGCCGCGGCG ACGGGCGGCT GCCGTTGGGC
GTGCAGAACA ACCTGTGGAC AGGCAGCGAC CATACCCCAT TTCAACTGGC CGGAGTGCGC
GCGATCACCT TTCACGGCCC GATCGATCGC GAGTCGGTTC GGTACTATCA CGACTTCGCC
GACACGATCG ACAAGCTGCC GGTCACGATC GTCGCTGATT CGGCGAAAGT GATCAGCGAT
CTGGTTGTGG CGCTGGCCAA CGACGCATCC GTGCCGGTCG TCCGGCGCTC GGCGGCGGAG
ACGGAGCGGA TGTTCGTCAA GGCGGGTGTC GACCAGCGGT TGCGCGGGCT CGGCTGGTGG
CCTTTCCCGT AA
|
|---|
| Protein sequence | MSVERLTRAV LAALALWVAA PAATGDNPEQ LPEPVIESAA RAHAMLTRLC DDFGGRLTGT
PPAQAALARL ALELRALGLE PKLRSFSMPG WERGDDRVEL LTPVPRKLRA AAFGYVQPHP
AFEADLVNLG AASEKEWPVG SIAGAVGLIT SSSSASLRAT VELAQVRGLR GLLYGGRESG
GQLLLRTGSH VGEPLPVPVY ALTDEEARWC ARRLQRGEPM RVRLETRSRC RTVETANLSV
TLKGRAPERI VVGAHFDSWD IGQGAIDNGL GVAQLFALAD ALRERKLERT VELIWFNGEE
QGLWGSREQA ARLGDTPIIA MINLDMVGVP QAVNALGDES LVPWLEQWNA RRGDGRLPLG
VQNNLWTGSD HTPFQLAGVR AITFHGPIDR ESVRYYHDFA DTIDKLPVTI VADSAKVISD
LVVALANDAS VPVVRRSAAE TERMFVKAGV DQRLRGLGWW PFP
|
|---|
| |