Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2864 |
Symbol | |
ID | 6208864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3661510 |
End bp | 3662379 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641692528 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001819745 |
Protein GI | 182414679 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.327148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA CGCACACCAG ACCCGAAATG ACGCTGATCA CCGGCGCATC GAGTGGAATC GGACTGGCCT TGGCCCGCGA ATTCGCTCGC CACGGGCACC CGCTGGCGAT CGTCGCGCCG GTCGAGCCCG AATTGCACGA GATCGCCGCG AAGTTGACCG CTGAGTTTGG CGTCACCGTG CTGCCGATCG CCAAGGATCT CGCGCAGGAG ACGGCCGCGG ACGAGATCTT CGATGCGCTG ATCAACGCGG GCGTATCGAT CGAGATCCTG GTCAACAACG CCGGCTTGGG TCAGCGGGGA AATTTCTGGG AGACGCCGCT CGACCGCGAC ATCGAGATCT TGCGCGTCAA CATCGAAGCG GCCCTTCGGC TGACGAAACG GTTTCTCTCA CCGATGATCG AGCGCAAGCG CGGCCGGATC CTCAACACCG CCTCGATCGC CGGATTCGAG CCGGGGCCGT TGCTGGCGGT TTATCATGCC TCGAAGGCCT TCGTGCTTTC GTGGTCCGAG GCGCTCGCGA CCGAACTGCA GGATGCCGAC AGCGGTGTCA CGCTTACCAC GCTGTGCCCC GGGCCGGTCG ACACGGACTT CTTCCCCAAA GCGGACATGG TTGACACGAA GGTTTTTCAA AAGGGGAACG TGATGAGCCC GCAGGAAGTC GCCGAGACGG CCTACGAGGC GTTGATGAAA GGCGAGCGCG TGATCGTGCC CGGTGCGATG AACAAGGCGA TTGTCGCGGG GCGGCGGATG ATGCCGATTT CGGCGCAAGC CCGGATGAAC GAGAAGATGT ATGAGGAAGT CGCACCGGAA GACCGCAAAC GCGAGCGGGG TGACATTGAA GAAAAAGAAG CAGCCCGCCG CGGCGAATGA
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Protein sequence | MKPTHTRPEM TLITGASSGI GLALAREFAR HGHPLAIVAP VEPELHEIAA KLTAEFGVTV LPIAKDLAQE TAADEIFDAL INAGVSIEIL VNNAGLGQRG NFWETPLDRD IEILRVNIEA ALRLTKRFLS PMIERKRGRI LNTASIAGFE PGPLLAVYHA SKAFVLSWSE ALATELQDAD SGVTLTTLCP GPVDTDFFPK ADMVDTKVFQ KGNVMSPQEV AETAYEALMK GERVIVPGAM NKAIVAGRRM MPISAQARMN EKMYEEVAPE DRKRERGDIE EKEAARRGE
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