Gene Oter_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2843 
Symbol 
ID6206228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3629563 
End bp3630126 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID641692507 
Productpeptidoglycan-binding LysM 
Protein accessionYP_001819724 
Protein GI182414658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.175188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAA CGGTCTTGTG GGCCTTGGTG CTCGCGGCCA GTGCGAGCGC GCAAACCCCG 
TCGGTTGAAC TGGCCAATCT GCGGGAAGAC GTGCGCGGAC TGGTGCAGCG CGTTGGTGAG
CTTTCGCTGC GTGTCGAACA GCTCGAGCGC GAAAACACCC AGCTGCGTGC GCAGGCCGGT
GAAGCGGGAC GGTCCTACGC CACCGTGGCG CAGCTCAACG AAGCCGTGGC CGCGCTGAAC
CAGAGCATCC GCGCCAGCGC AGCGAGCACC CGGTCGGAGA CGCTGCAGCA GGTGAGCGGG
CAAATGGAAA CGCTCGCGAA GCAAACCAAC GCCGCGATCG ACTCGCTGGC GAAAGGCCTG
GCCACGCGCG CTCCGGTGCA GACGACGTTC ACCGAAGATT ATCCGAAGGA AGGCATCAGC
TACACGGTGC AGCGCGGCGA CACGCTCGCG GTCATCGCGC GCAAAACCGG CGCGAAGGTG
CAGGACATCG TCAACGCGAA CAAGATTTCC GATCCGTCCC GGATCAACGT CGGCCAGACC
CTTTTTATCC CCGGAGGAAA GTAA
 
Protein sequence
MWKTVLWALV LAASASAQTP SVELANLRED VRGLVQRVGE LSLRVEQLER ENTQLRAQAG 
EAGRSYATVA QLNEAVAALN QSIRASAAST RSETLQQVSG QMETLAKQTN AAIDSLAKGL
ATRAPVQTTF TEDYPKEGIS YTVQRGDTLA VIARKTGAKV QDIVNANKIS DPSRINVGQT
LFIPGGK