Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2809 |
Symbol | |
ID | 6206571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3586414 |
End bp | 3588279 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692472 |
Product | phosphotransferase domain-containing protein |
Protein accession | YP_001819690 |
Protein GI | 182414624 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1796] DNA polymerase IV (family X) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.102526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000714673 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGAAAC ACGAGATCGC CGACGTGCTG AACGAGATCG CGCTGTTGCT CGAGTTGAAG GGCGAAAACC CGTTCAAGAT CCGTGCATAT CAGTCGGGCG CACGCGTCAT CGAATCGCTC GAACAGCCGG AACTCGAACG GCTGTTGGCC GCGAATGAGC TCCTCACGGT GAAAGGAATC GGCGAGGCGC TGGCCAAAAA GATCGCCGAG CTGCACACGA CGGGAAAACT GGAATTTCTG GAGAAGCTGC GCGCCACGAT CGCGCCTGGA CTGGTCGAGC TGCTGCAGAT CCCCGGGGTC GGCCCGAAGA AAATCAAGGT GCTGCACGAG CAACTCGGCG TCGTCGACAT CGCCAGCCTC GCGGCGGCGT GTGCCGACGG TCGCGTCGCT GCGCTCGCCG GGTTCGGCGC CAAGACGCAG GAGAAGATCG TCGCCGGCAT CAAAAACCGC GAAGCGTACG GCCGGCGCCA TCTCTGGTGG GAAGCGTGGC AAGTGGCGCA GCCGATCGTC GCCGGACTGC GGGCGTTGCC CCAGGTGAAA CGCGCCGAGG CGGCGGGCAG CCTGCGACGC GGGCTGGAGA CCGTGGGGGA TCTCGACTTC ATCGTTTCTG CCACCGAAAT CGAGCCGGTG GTGAGCTGGT TCGTAGGCCT GTCGGACGTG CAGGAGGTCA CCGCGCGCGG CGAGACGAAG ACCAGCGTGC GTTTCGTGAC CGGGCTGCAG GCGGACCTTC GGCTGGTGCC GGACGAGCAG TTCATCTTCG CGCTGCATCA CTTCACCGGA TCCAAGGACC ACAACGTACA GATGCGGCAG CGGGCGCTGG CGCGCGGGCT GACGTTGAGC GAGTGGGGGC TCGAGCCGGT GACGGCCGCG ACATCCGAGA GCTCAGCCAG CCCATCGAGT TCGCTGACGG CGGCAGCGGG AGCTGGCGAG GCCGCGGCGC CGCGAGCCCG CCGGCCAAAG CGGGCGGGCG CACCTGCCGA CGCGGCCTCA GGCGATCCGG CGCGCGGAAG CGTTGCGACG GAGGCGGACC TGTTCGCCCG TCTCGGACTT CATTTTATCC CCCCCGAGTT GCGCGAAGGT ATGGGCGAAA TCGAAGCGGC GGAGCACGGC GAGTTGCCAA CGTTGGTGGA TTTGCCGGAC CTCCGCGGGA CGTTTCATTG CCACACGACG GCCTCGGATG GACGCAACAC CCTCGCCGAA ATGGCGACGG CCGCCGCCAG CGCGGGCTGG GAGTATCTCG GAATTGCCGA CCATTCGAAA TCCAGCTTTC AGGCAAACGG GTTGACCGAG CAGCGGCTCC TGGAACAGGT CGAGGCGATC CGGGTGTTCA ACGCGTCCGG CCGCTGTCGC ACGCATGTGT TTGCGGGCAC CGAGTGCGAC ATCCTGCCGG ACGGCCGGCT CGACTTTGAC GAAGCGCTGC TGAGGAAGCT CGACTACGTC GTGGCCTCCG TGCACAGCAC CTTTGCGCTC GACGAGGCGG CGATGACTGC GCGGATCATC CGGGCGATCG AACATCCGTG CACGACGATG CTGGGGCATC TGACGGGCCG GCTGCTGTTG CGCCGCGACG GCTACCGCGT GGACGCGGGC AAAATCATCG ACGCGGCGAT TGCGCACGGC GTGATCATCG AGATCAATGC CGCGCCCAAG CGGCTCGACA TGGATTGGCG GCACTGGCGC AAGGCCACGG CCCGAGGACT GCTGACGTCG ATCAACCCCG ACGCCCATGA AACGGCGGAG CTGGCCTACG TGCGGGCGGG CATCAATACG GCCCGCAAGG GCTGGCTGAC GAAAGCTCAG GTCTTCAACA CGCGTTCGCT GGCGGAAGTG AAAGCGGCAT TTCTGGCTCG GCGACGGGCT GGCTGA
|
Protein sequence | MTKHEIADVL NEIALLLELK GENPFKIRAY QSGARVIESL EQPELERLLA ANELLTVKGI GEALAKKIAE LHTTGKLEFL EKLRATIAPG LVELLQIPGV GPKKIKVLHE QLGVVDIASL AAACADGRVA ALAGFGAKTQ EKIVAGIKNR EAYGRRHLWW EAWQVAQPIV AGLRALPQVK RAEAAGSLRR GLETVGDLDF IVSATEIEPV VSWFVGLSDV QEVTARGETK TSVRFVTGLQ ADLRLVPDEQ FIFALHHFTG SKDHNVQMRQ RALARGLTLS EWGLEPVTAA TSESSASPSS SLTAAAGAGE AAAPRARRPK RAGAPADAAS GDPARGSVAT EADLFARLGL HFIPPELREG MGEIEAAEHG ELPTLVDLPD LRGTFHCHTT ASDGRNTLAE MATAAASAGW EYLGIADHSK SSFQANGLTE QRLLEQVEAI RVFNASGRCR THVFAGTECD ILPDGRLDFD EALLRKLDYV VASVHSTFAL DEAAMTARII RAIEHPCTTM LGHLTGRLLL RRDGYRVDAG KIIDAAIAHG VIIEINAAPK RLDMDWRHWR KATARGLLTS INPDAHETAE LAYVRAGINT ARKGWLTKAQ VFNTRSLAEV KAAFLARRRA G
|
| |