Gene Oter_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2709 
Symbol 
ID6205961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3465764 
End bp3471751 
Gene Length5988 bp 
Protein Length1995 aa 
Translation table11 
GC content65% 
IMG OID641692369 
Productexcinuclease ABC, A subunit 
Protein accessionYP_001819590 
Protein GI182414524 
COG category[L] Replication, recombination and repair
[V] Defense mechanisms 
COG ID[COG0178] Excinuclease ATPase subunit
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.350248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGCTG TGGTCAAGTC CTCCCGCCCT GCTCCCGAAT GCATCCGCCT GCGCGGCGTC 
CGCCAGAATA ACCTGAAAGG GTTCGATCTG GACGTTCCGC TCGGCCGTTA CATCGCGGTC
ACCGGGCTCA GCGGCGCGGG CAAGTCCTCC CTCGTTTTCG ACACGCTCCA CGCCGAAGGC
CAGCGCCGCT ACGTCGAGAC GTTCAGCGCC TACACCCGGC AGTTCCTCGA TCTTCTCAAC
AAGCCCAAGG TCGACTCGAT CGAGAACATC CGACCATCGA TCGCCATCGA GCAGACCAAC
ACGGTCAAAA CCTCGCGCTC GACGGTCGGC ACGATGACCG AGCTGACGGA TTTTTTTAAA
GTCTGGTTCA GTCACGTGGC CGAGTGCTTC GACCCCGAGA CCGGCGAGAA GGTCGAGGAC
GACAATCCGC AGAGCATCTG GGCCAAGACC TCTGCGGCGC ATCCCAACCG AGCCGTGATC
GTAGCCTTCA AGGTCACCAA GCCCGCGAAC CTCACCTGGC CGGAGATTCT CCAAAACCTC
AAGGCTCAGT CCTACGTTCG GGTCCTGCTC GCCGCCGCCG CAGCCGCTAC CCGCAACCCA
CCGCAGCTGC ACCGGCTGGA GGATTTGCTC AGCGCCAGCT CCGATCCGGC GACGATCCAC
CCTCAGCTCT CCGGCGCGTC GGAACTTTTC GTCGTGCAGG ATCGGATCAC GATCGCCGCG
GCCGAAAAGC CCCGGTTCCT CGAAGCCGTC GAAACCGCGC TCCACTTCGG CCAGGGCCAG
GTGCACCTGT TCGCCGCGGA TGGTTTCGCC GAGCTTGGTC ACTTCTCGCG TGGACTGCAC
TCGCCCAAAA CCGGCCGCAC CTTCCGCGCC GCGACGCCGG CGCTGTTCTC GTTCAACTCG
CCGCTCGGCG CGTGTCCGCA CTGCCGCGGG TTTGGCCGGG TGATCGAAAT CGACTACCGG
CTCGCGGTGC CGGACCAGTC GCTCTCGATC GACCAGGGCG TCATCAAGTG CTGGGAGAGC
GAAATCTACG GCGAATCGAA AAAGGACCTC TACGTCTTCA CGAAGAAGAA GCGGATTCCG
ACGAACGTCC CGTTCGCTTC GCTCACGCCA GAGCAGCGCG ACTACGTGAT CAACGGCGAA
CCCGGCTACG GCGAGGAGAA CGGCAAGACG TGGCCGCAGT ACTGGTATGG CGTGAAGGGT
TTCTTCCGCT GGCTCGAGAA GAACACGTAC AAGATGCACG TGCGCGTGTT CCTGGCGCGC
TATCGGGCCT ACAACCCGTG CCCCGCGTGC GGCGGCCAGC GGCTGCAGCC CGAAGCGCTG
TGCTGGAAAT GGCAGGGGCG CACGCTCCCT GATCTCTACC AGCTGCCGGT CTCCGATCTG
CTCGCGCAGC TCGCCTCCAA AGCGGCCCGG CACGGGCACG ACACCGCGAG GAAATCGGAT
TCACGCAGCG AAACACTCGC CTACGACTCG ATCGTCACGC GGCTGCGTTA CCTCGAACAG
GTGGGACTCG GTTACCTCAC GTTGGATCGC CAATCGCGCA CGCTGTCGGG TGGCGAGGTC
GAACGCGTGA ATTTGACCAG CTGCCTCGGC ACCTCGCTCG TCGATACGTT GTTCGTGCTC
GATGAACCGA GCGTCGGGCT GCATCCGCGC GACATCGATC GGCTGATCGC GATCATCCGC
ACGCTGACGA ACGCCGGCAA CACGGTGGTC GTTGTGGAGC ACGATGAGGC CATGATCCGT
GCCGCCGATC ACGTGATCGA GGTCGGTCCC GAGCCCGGCG GCCGCGGCGG ACACATTGTG
TTCGAGGGCA CCGTGTCCGA GATGCTCCGC TCGCGCGAAA GCGTGACCGG CGCCTATTTC
TCCGGTCGGG AGACGATCGA AACACCTGCG CGCCGCCGCC CTGTTTCCCT GGGAGCGCGG
GCGTCCCGCC CGCAATCAGC GAACGCTGCT GCGCCGTCCA GCTCCCCGCA GTGGCTCACG
TTCACCGACG TCTCGAAGCA CAACCTCGCT CATCTCACGT TCCGGCTGCC GCTGGGCCGT
TTCGTCTGCC TCAGCGGCGT CTCCGGCTCC GGCAAATCGA CGCTGCTCGA CAACGTCATC
TACCAAGGCC TGCTCACGCA ACGGCTGCAG CTGGCGGAAG ATCCCGCCGA GATCAAAGCG
ATCACGCCCG CGCCCGACAC CGCGCCGTTT GGCGAGCTCG TCCTTGTCGA TCAGTCGCCG
CTGTCGAAAA CGCCGCGCTC GAATCCCGCG CTCTACTCGG AGGCATGGGA GCTGATCCGC
GAACTCTACG CTCGCACGCC GGCCGCGCAG GAAGCGGGCT TCAACAGTTC GAGCTTCTCG
TTCAACAGCG GTGAGGGTCG CTGCGAGCAC TGTCAGGGAC TCGGCTACGA GCGCGTGGAG
ATGCAGTTTC TCTCCGACGT GTTCGTGCCC TGCCCGATCT GCGACGGCCG GCGCTTCAAG
CCCGAGGTGC TCGCGATCCA GTGGAACGGC CGCTCCGTCG CCGACCTGCT CGCGACGAGC
ATCAATGACG CGCTGCCGCT GTTCACGGAA CACCCGGAGA TCCATCGACG GCTCGCCGCG
CTCGAGACGG TGGGTCTCGG CTACCTGACG CTCGGCCAGC CGCTCAATAC GCTCAGCGGC
GGTGAATCGC AGCGGCTGAA GCTGGTCCGC TATTTAGGCG ACTACACAGC TCAGGAGGTC
GGTTCGCCCT ATCCGAATTC CGCCGGCGCC CTGCTGCTCC TCGACGAGCC GACGACCGGT
CTGCACCGTC ATGACGTCAA GCGATTGCTA TCCGTCTTGC ACGCGCTCGT CGACCGCGGC
CACAGCGTCG TCGTGATTGA GCACAATCTC GACGTGCTGA AATCCGCCGA CTGGCTGATT
GAGATCGGCC CCGACGCCGG CGCAAACGGC GGACGTATCG TCGCCGAGGG CACGCCGGAA
GACGTGGCCG CGGCGAACAC CGCCACGTCG CCCTTCCTGC GCGCAGCGCT GGAGGCAGAG
TCTGGCGGCA GGACTCCAGA GCTGAAAGCA GCCGAGTCGG CCGCCCGCAA CGGGGCGTCT
GCACTTCAAC CCTCAACTTC AAACCTCAAC TCGATCTCAA GCTCGCTGGA GATCGAGGGC
GCCCGCGAGA ACAACCTCAA GAACCTCTCC GTCGCGATTC CGCACCGCCA GCTGTCCGTG
GTCACCGGCG TTTCCGGCTC CGGCAAGTCG ACACTCGCCT TCGACATCGT GTTCGCGGAG
GGCCAGCGGC GGTTCATGGA GTCGATGTCG CCCTACGCGC GGCAGTTCGT CGAACAGCTG
CCCCGCCCCG CCGTCGACCG GCTGACCGGC ATTCCGCCGA CCGTCGCGAT CGAACAGCGC
GTCACGCGCG GCTCGCGCAA GTCGACGGTC GCGACGATCA CCGAGGTGGC CCAATATCTT
CGGCTGCTCT ACGCGCGGCT CGGGATCCAG CACCACCCAG AAACCGATCA GCCGGTCGAA
CCGCTTTCGC CGGCACAGCT GAAATCGCTG CTCAGCCGCG TTCTCTCCGA AAACCCAAAG
GCCAGAAAAG CGCGCCATCT CTATCTCTGC GCGCCGCTCA TCCGCGGGCG CAAGGGCCAC
CACCAGCCCA TCGCCACGTG GATCGCGAAC CAAGGCTACG AGCTAATGCG CGCGGATGGA
CAGCTCACGC GCGTCGACGC GTTCCAGAAA CTCGACCGTT ATCGCGAACA CGACATCGAG
GTGGTCGTCG CGGATCTGAA AACCGGGAGC CCAGCGTCCA GAGCCAAGAG CAAAAGTTCT
GGCTCTCAGC TCTCCGCTCC CAGCTCTCGG CTGTCCGAGG CGCTTCGCCT CGGCAAGGGC
TCGTGCTTCC TGCTCACCGA ACGCGGCGAG ATCCTGTCCT GGTTCTCCAC CACGCGCACC
GACATCCACA CGGGCGAGTC TTTTCCGGAA CTCGACCCAA AACATTTCTC GTTCAACTCG
CCCCGCGGCT GGTGTCCCAC CTGTCGTGGA CACGGCCGCG TGTTCCCGTG GATGCTCGAG
CCAGATGAAG ACGCCGAGGA CGATCCGGCT GCCCGGCTCC GCGAGTTCGG CATCGACTCC
GCGGACGACG TGTCCGACGC CGGCCAGCCC TGTCCCGAAT GCCACGGTGC CCGGCTCAAC
CGGATCGCTC GCGCCGTGAA GCTTCACTTC AAAGCTCCGG GGCGCCGCGG CCGCCGGGCT
CCTGCTCGAG CCTCTCAACC CTCAGCGCTC AACTCTCAAC CCACCTACGC GCTTTCGCTG
CCCGAACTGT TGACGTCGAC CCCGGCCCAC CTGCTGGCAC ATCTGCGCGA GCTGGATCTC
GACGCGCGCG GCCGGCTTAT CACGCAAGAC ATCATCCCGC AGATTGAGGA GCGTCTCCGG
TTTCTGGACC ACGTGGGTCT CGGCTATCTG TCGCTCGAAC GCCCGACCGA AACGCTCTCC
GGCGGCGAAG CGCAGCGCAT CCGACTCGCG GCCCAGCTCG GCTCGAATCT CTCCGGCGTG
CTCTACGTGC TCGACGAGCC GTCGATCGGC CTGCACGCGC GCGACAACGA CCGGCTGATC
GAAACGCTCC AATCGCTGCG GGAAAAGGGC AACACGCTCC TGGTCGTCGA ACACGACGAC
GAGCTCATGG AGCGCGCCGA CCGCATCATC GACCTGGGCC CCGCAGCAGG CGTTCACGGC
GGTGAGCTGT TGGCCAACGG CACGCCCGCG GAGATCAAGC GCAGCGCGAA ATCGCTCACC
GGACTCTTCC TCAAGAAAGG CATCGCGCAT CCGCTCCGCG GCGAGTATCG GCCGGCAATG
TGGCATGGGC GTCTCGCCCG TGTGGCGACA CGCGCGAAGG CCAAACTCAC GGGCGGGACG
CCCGTGCCAC AGCAGTGGCT CGAGCTTCGC GGCGCCTTGT TCCGCAATCT CAAGGGCTTT
GACCTACGAC TCCCACTCGG ACGGTTGATC ATGGTCGCCG GTCCTTCCGG CGCCGGCAAA
TCGACGCTCT TCCGCGACGT GCTCGATCCC GCCGTCTCGT TCGCGATCAA GGAACAGAAG
GCGTCGCTCA CCGGCCGCGA GTTCGTGAAG GCCACCGGCT TTGTCGTTGC CGACTCTCAT
CTCTCAACTC TCAGCACTCA ACTGCCGTTT GCGGAGCTCC GCGGAGCAAA CGGCTTCAAA
CGGGTCATCG AGGTCGACCA ATCCCCTATC GGCAAAACGC CGCGCTCCAC GCCGGCGACC
TACCTCGGCA TCTTCGATCT CATCCGGCAG TTCTTCGCGT CGCTGCCCGA AGCGAAGATC
CGCGGCTACA CGGCGTCGCG ATTTTCCTTC AACACCACCG GCGGACGCTG CCCCACCTGC
GAGGGCGCGG GTCGGATCAA GCTCGAGATG GCGTTCATGC CGGACACTTA CCTGCCGTGC
GACGACTGCC ACGGTCTGCG CTACGGCCCG GAGCTCGCGG ACATCACCTG GAAAGGCAAA
AGCATCGGCG AGGTGCTGCA GCTCACGTTC GAGGAAGCCG CGCAGTTTTT CGACTTCCAC
TCGCAGCTCG CGCAGGTCTG CCAGCTCATG GTCGATTGCG GCCTCGGCTA CCTCACGCTC
GGCCAGTCGT CACCCACGCT CTCCGGCGGC GAAGCACAGC GGCTCAAGCT CGTGACCGAG
CTTTCCGCCG GGCTCGCCAG CTACCGCGAG CGCAGTCGCG GCGAGCGTCC GCGCAATCTT
TACCTACTTG AGGAGCCGAC CATCGGGCTC CACCTCAGCG ACTGCGAGAA ACTGATCCGC
GTGCTGCACT CGCTCGTCGA TCAGGGGCAC ACAGTCATCG TGATCGAACA TCACCTCGAT
CTGCTCGCCG AAGCCGACTA CATCGTCGAG CTTGGTCCGG TCGGCGGTCC GGATGGCGGC
GAGCTACTCT ACCAAGGCGA ACTTGCCGGC TTGTTGAAGG TGCGCGGCAG TCCCACCGCC
CCCTATCTCC GCGCGAAACT CAACGGCCAC CGCCGCGCCC AACCGTAG
 
Protein sequence
MHAVVKSSRP APECIRLRGV RQNNLKGFDL DVPLGRYIAV TGLSGAGKSS LVFDTLHAEG 
QRRYVETFSA YTRQFLDLLN KPKVDSIENI RPSIAIEQTN TVKTSRSTVG TMTELTDFFK
VWFSHVAECF DPETGEKVED DNPQSIWAKT SAAHPNRAVI VAFKVTKPAN LTWPEILQNL
KAQSYVRVLL AAAAAATRNP PQLHRLEDLL SASSDPATIH PQLSGASELF VVQDRITIAA
AEKPRFLEAV ETALHFGQGQ VHLFAADGFA ELGHFSRGLH SPKTGRTFRA ATPALFSFNS
PLGACPHCRG FGRVIEIDYR LAVPDQSLSI DQGVIKCWES EIYGESKKDL YVFTKKKRIP
TNVPFASLTP EQRDYVINGE PGYGEENGKT WPQYWYGVKG FFRWLEKNTY KMHVRVFLAR
YRAYNPCPAC GGQRLQPEAL CWKWQGRTLP DLYQLPVSDL LAQLASKAAR HGHDTARKSD
SRSETLAYDS IVTRLRYLEQ VGLGYLTLDR QSRTLSGGEV ERVNLTSCLG TSLVDTLFVL
DEPSVGLHPR DIDRLIAIIR TLTNAGNTVV VVEHDEAMIR AADHVIEVGP EPGGRGGHIV
FEGTVSEMLR SRESVTGAYF SGRETIETPA RRRPVSLGAR ASRPQSANAA APSSSPQWLT
FTDVSKHNLA HLTFRLPLGR FVCLSGVSGS GKSTLLDNVI YQGLLTQRLQ LAEDPAEIKA
ITPAPDTAPF GELVLVDQSP LSKTPRSNPA LYSEAWELIR ELYARTPAAQ EAGFNSSSFS
FNSGEGRCEH CQGLGYERVE MQFLSDVFVP CPICDGRRFK PEVLAIQWNG RSVADLLATS
INDALPLFTE HPEIHRRLAA LETVGLGYLT LGQPLNTLSG GESQRLKLVR YLGDYTAQEV
GSPYPNSAGA LLLLDEPTTG LHRHDVKRLL SVLHALVDRG HSVVVIEHNL DVLKSADWLI
EIGPDAGANG GRIVAEGTPE DVAAANTATS PFLRAALEAE SGGRTPELKA AESAARNGAS
ALQPSTSNLN SISSSLEIEG ARENNLKNLS VAIPHRQLSV VTGVSGSGKS TLAFDIVFAE
GQRRFMESMS PYARQFVEQL PRPAVDRLTG IPPTVAIEQR VTRGSRKSTV ATITEVAQYL
RLLYARLGIQ HHPETDQPVE PLSPAQLKSL LSRVLSENPK ARKARHLYLC APLIRGRKGH
HQPIATWIAN QGYELMRADG QLTRVDAFQK LDRYREHDIE VVVADLKTGS PASRAKSKSS
GSQLSAPSSR LSEALRLGKG SCFLLTERGE ILSWFSTTRT DIHTGESFPE LDPKHFSFNS
PRGWCPTCRG HGRVFPWMLE PDEDAEDDPA ARLREFGIDS ADDVSDAGQP CPECHGARLN
RIARAVKLHF KAPGRRGRRA PARASQPSAL NSQPTYALSL PELLTSTPAH LLAHLRELDL
DARGRLITQD IIPQIEERLR FLDHVGLGYL SLERPTETLS GGEAQRIRLA AQLGSNLSGV
LYVLDEPSIG LHARDNDRLI ETLQSLREKG NTLLVVEHDD ELMERADRII DLGPAAGVHG
GELLANGTPA EIKRSAKSLT GLFLKKGIAH PLRGEYRPAM WHGRLARVAT RAKAKLTGGT
PVPQQWLELR GALFRNLKGF DLRLPLGRLI MVAGPSGAGK STLFRDVLDP AVSFAIKEQK
ASLTGREFVK ATGFVVADSH LSTLSTQLPF AELRGANGFK RVIEVDQSPI GKTPRSTPAT
YLGIFDLIRQ FFASLPEAKI RGYTASRFSF NTTGGRCPTC EGAGRIKLEM AFMPDTYLPC
DDCHGLRYGP ELADITWKGK SIGEVLQLTF EEAAQFFDFH SQLAQVCQLM VDCGLGYLTL
GQSSPTLSGG EAQRLKLVTE LSAGLASYRE RSRGERPRNL YLLEEPTIGL HLSDCEKLIR
VLHSLVDQGH TVIVIEHHLD LLAEADYIVE LGPVGGPDGG ELLYQGELAG LLKVRGSPTA
PYLRAKLNGH RRAQP