Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2709 |
Symbol | |
ID | 6205961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3465764 |
End bp | 3471751 |
Gene Length | 5988 bp |
Protein Length | 1995 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641692369 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_001819590 |
Protein GI | 182414524 |
COG category | [L] Replication, recombination and repair [V] Defense mechanisms |
COG ID | [COG0178] Excinuclease ATPase subunit [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.350248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGCTG TGGTCAAGTC CTCCCGCCCT GCTCCCGAAT GCATCCGCCT GCGCGGCGTC CGCCAGAATA ACCTGAAAGG GTTCGATCTG GACGTTCCGC TCGGCCGTTA CATCGCGGTC ACCGGGCTCA GCGGCGCGGG CAAGTCCTCC CTCGTTTTCG ACACGCTCCA CGCCGAAGGC CAGCGCCGCT ACGTCGAGAC GTTCAGCGCC TACACCCGGC AGTTCCTCGA TCTTCTCAAC AAGCCCAAGG TCGACTCGAT CGAGAACATC CGACCATCGA TCGCCATCGA GCAGACCAAC ACGGTCAAAA CCTCGCGCTC GACGGTCGGC ACGATGACCG AGCTGACGGA TTTTTTTAAA GTCTGGTTCA GTCACGTGGC CGAGTGCTTC GACCCCGAGA CCGGCGAGAA GGTCGAGGAC GACAATCCGC AGAGCATCTG GGCCAAGACC TCTGCGGCGC ATCCCAACCG AGCCGTGATC GTAGCCTTCA AGGTCACCAA GCCCGCGAAC CTCACCTGGC CGGAGATTCT CCAAAACCTC AAGGCTCAGT CCTACGTTCG GGTCCTGCTC GCCGCCGCCG CAGCCGCTAC CCGCAACCCA CCGCAGCTGC ACCGGCTGGA GGATTTGCTC AGCGCCAGCT CCGATCCGGC GACGATCCAC CCTCAGCTCT CCGGCGCGTC GGAACTTTTC GTCGTGCAGG ATCGGATCAC GATCGCCGCG GCCGAAAAGC CCCGGTTCCT CGAAGCCGTC GAAACCGCGC TCCACTTCGG CCAGGGCCAG GTGCACCTGT TCGCCGCGGA TGGTTTCGCC GAGCTTGGTC ACTTCTCGCG TGGACTGCAC TCGCCCAAAA CCGGCCGCAC CTTCCGCGCC GCGACGCCGG CGCTGTTCTC GTTCAACTCG CCGCTCGGCG CGTGTCCGCA CTGCCGCGGG TTTGGCCGGG TGATCGAAAT CGACTACCGG CTCGCGGTGC CGGACCAGTC GCTCTCGATC GACCAGGGCG TCATCAAGTG CTGGGAGAGC GAAATCTACG GCGAATCGAA AAAGGACCTC TACGTCTTCA CGAAGAAGAA GCGGATTCCG ACGAACGTCC CGTTCGCTTC GCTCACGCCA GAGCAGCGCG ACTACGTGAT CAACGGCGAA CCCGGCTACG GCGAGGAGAA CGGCAAGACG TGGCCGCAGT ACTGGTATGG CGTGAAGGGT TTCTTCCGCT GGCTCGAGAA GAACACGTAC AAGATGCACG TGCGCGTGTT CCTGGCGCGC TATCGGGCCT ACAACCCGTG CCCCGCGTGC GGCGGCCAGC GGCTGCAGCC CGAAGCGCTG TGCTGGAAAT GGCAGGGGCG CACGCTCCCT GATCTCTACC AGCTGCCGGT CTCCGATCTG CTCGCGCAGC TCGCCTCCAA AGCGGCCCGG CACGGGCACG ACACCGCGAG GAAATCGGAT TCACGCAGCG AAACACTCGC CTACGACTCG ATCGTCACGC GGCTGCGTTA CCTCGAACAG GTGGGACTCG GTTACCTCAC GTTGGATCGC CAATCGCGCA CGCTGTCGGG TGGCGAGGTC GAACGCGTGA ATTTGACCAG CTGCCTCGGC ACCTCGCTCG TCGATACGTT GTTCGTGCTC GATGAACCGA GCGTCGGGCT GCATCCGCGC GACATCGATC GGCTGATCGC GATCATCCGC ACGCTGACGA ACGCCGGCAA CACGGTGGTC GTTGTGGAGC ACGATGAGGC CATGATCCGT GCCGCCGATC ACGTGATCGA GGTCGGTCCC GAGCCCGGCG GCCGCGGCGG ACACATTGTG TTCGAGGGCA CCGTGTCCGA GATGCTCCGC TCGCGCGAAA GCGTGACCGG CGCCTATTTC TCCGGTCGGG AGACGATCGA AACACCTGCG CGCCGCCGCC CTGTTTCCCT GGGAGCGCGG GCGTCCCGCC CGCAATCAGC GAACGCTGCT GCGCCGTCCA GCTCCCCGCA GTGGCTCACG TTCACCGACG TCTCGAAGCA CAACCTCGCT CATCTCACGT TCCGGCTGCC GCTGGGCCGT TTCGTCTGCC TCAGCGGCGT CTCCGGCTCC GGCAAATCGA CGCTGCTCGA CAACGTCATC TACCAAGGCC TGCTCACGCA ACGGCTGCAG CTGGCGGAAG ATCCCGCCGA GATCAAAGCG ATCACGCCCG CGCCCGACAC CGCGCCGTTT GGCGAGCTCG TCCTTGTCGA TCAGTCGCCG CTGTCGAAAA CGCCGCGCTC GAATCCCGCG CTCTACTCGG AGGCATGGGA GCTGATCCGC GAACTCTACG CTCGCACGCC GGCCGCGCAG GAAGCGGGCT TCAACAGTTC GAGCTTCTCG TTCAACAGCG GTGAGGGTCG CTGCGAGCAC TGTCAGGGAC TCGGCTACGA GCGCGTGGAG ATGCAGTTTC TCTCCGACGT GTTCGTGCCC TGCCCGATCT GCGACGGCCG GCGCTTCAAG CCCGAGGTGC TCGCGATCCA GTGGAACGGC CGCTCCGTCG CCGACCTGCT CGCGACGAGC ATCAATGACG CGCTGCCGCT GTTCACGGAA CACCCGGAGA TCCATCGACG GCTCGCCGCG CTCGAGACGG TGGGTCTCGG CTACCTGACG CTCGGCCAGC CGCTCAATAC GCTCAGCGGC GGTGAATCGC AGCGGCTGAA GCTGGTCCGC TATTTAGGCG ACTACACAGC TCAGGAGGTC GGTTCGCCCT ATCCGAATTC CGCCGGCGCC CTGCTGCTCC TCGACGAGCC GACGACCGGT CTGCACCGTC ATGACGTCAA GCGATTGCTA TCCGTCTTGC ACGCGCTCGT CGACCGCGGC CACAGCGTCG TCGTGATTGA GCACAATCTC GACGTGCTGA AATCCGCCGA CTGGCTGATT GAGATCGGCC CCGACGCCGG CGCAAACGGC GGACGTATCG TCGCCGAGGG CACGCCGGAA GACGTGGCCG CGGCGAACAC CGCCACGTCG CCCTTCCTGC GCGCAGCGCT GGAGGCAGAG TCTGGCGGCA GGACTCCAGA GCTGAAAGCA GCCGAGTCGG CCGCCCGCAA CGGGGCGTCT GCACTTCAAC CCTCAACTTC AAACCTCAAC TCGATCTCAA GCTCGCTGGA GATCGAGGGC GCCCGCGAGA ACAACCTCAA GAACCTCTCC GTCGCGATTC CGCACCGCCA GCTGTCCGTG GTCACCGGCG TTTCCGGCTC CGGCAAGTCG ACACTCGCCT TCGACATCGT GTTCGCGGAG GGCCAGCGGC GGTTCATGGA GTCGATGTCG CCCTACGCGC GGCAGTTCGT CGAACAGCTG CCCCGCCCCG CCGTCGACCG GCTGACCGGC ATTCCGCCGA CCGTCGCGAT CGAACAGCGC GTCACGCGCG GCTCGCGCAA GTCGACGGTC GCGACGATCA CCGAGGTGGC CCAATATCTT CGGCTGCTCT ACGCGCGGCT CGGGATCCAG CACCACCCAG AAACCGATCA GCCGGTCGAA CCGCTTTCGC CGGCACAGCT GAAATCGCTG CTCAGCCGCG TTCTCTCCGA AAACCCAAAG GCCAGAAAAG CGCGCCATCT CTATCTCTGC GCGCCGCTCA TCCGCGGGCG CAAGGGCCAC CACCAGCCCA TCGCCACGTG GATCGCGAAC CAAGGCTACG AGCTAATGCG CGCGGATGGA CAGCTCACGC GCGTCGACGC GTTCCAGAAA CTCGACCGTT ATCGCGAACA CGACATCGAG GTGGTCGTCG CGGATCTGAA AACCGGGAGC CCAGCGTCCA GAGCCAAGAG CAAAAGTTCT GGCTCTCAGC TCTCCGCTCC CAGCTCTCGG CTGTCCGAGG CGCTTCGCCT CGGCAAGGGC TCGTGCTTCC TGCTCACCGA ACGCGGCGAG ATCCTGTCCT GGTTCTCCAC CACGCGCACC GACATCCACA CGGGCGAGTC TTTTCCGGAA CTCGACCCAA AACATTTCTC GTTCAACTCG CCCCGCGGCT GGTGTCCCAC CTGTCGTGGA CACGGCCGCG TGTTCCCGTG GATGCTCGAG CCAGATGAAG ACGCCGAGGA CGATCCGGCT GCCCGGCTCC GCGAGTTCGG CATCGACTCC GCGGACGACG TGTCCGACGC CGGCCAGCCC TGTCCCGAAT GCCACGGTGC CCGGCTCAAC CGGATCGCTC GCGCCGTGAA GCTTCACTTC AAAGCTCCGG GGCGCCGCGG CCGCCGGGCT CCTGCTCGAG CCTCTCAACC CTCAGCGCTC AACTCTCAAC CCACCTACGC GCTTTCGCTG CCCGAACTGT TGACGTCGAC CCCGGCCCAC CTGCTGGCAC ATCTGCGCGA GCTGGATCTC GACGCGCGCG GCCGGCTTAT CACGCAAGAC ATCATCCCGC AGATTGAGGA GCGTCTCCGG TTTCTGGACC ACGTGGGTCT CGGCTATCTG TCGCTCGAAC GCCCGACCGA AACGCTCTCC GGCGGCGAAG CGCAGCGCAT CCGACTCGCG GCCCAGCTCG GCTCGAATCT CTCCGGCGTG CTCTACGTGC TCGACGAGCC GTCGATCGGC CTGCACGCGC GCGACAACGA CCGGCTGATC GAAACGCTCC AATCGCTGCG GGAAAAGGGC AACACGCTCC TGGTCGTCGA ACACGACGAC GAGCTCATGG AGCGCGCCGA CCGCATCATC GACCTGGGCC CCGCAGCAGG CGTTCACGGC GGTGAGCTGT TGGCCAACGG CACGCCCGCG GAGATCAAGC GCAGCGCGAA ATCGCTCACC GGACTCTTCC TCAAGAAAGG CATCGCGCAT CCGCTCCGCG GCGAGTATCG GCCGGCAATG TGGCATGGGC GTCTCGCCCG TGTGGCGACA CGCGCGAAGG CCAAACTCAC GGGCGGGACG CCCGTGCCAC AGCAGTGGCT CGAGCTTCGC GGCGCCTTGT TCCGCAATCT CAAGGGCTTT GACCTACGAC TCCCACTCGG ACGGTTGATC ATGGTCGCCG GTCCTTCCGG CGCCGGCAAA TCGACGCTCT TCCGCGACGT GCTCGATCCC GCCGTCTCGT TCGCGATCAA GGAACAGAAG GCGTCGCTCA CCGGCCGCGA GTTCGTGAAG GCCACCGGCT TTGTCGTTGC CGACTCTCAT CTCTCAACTC TCAGCACTCA ACTGCCGTTT GCGGAGCTCC GCGGAGCAAA CGGCTTCAAA CGGGTCATCG AGGTCGACCA ATCCCCTATC GGCAAAACGC CGCGCTCCAC GCCGGCGACC TACCTCGGCA TCTTCGATCT CATCCGGCAG TTCTTCGCGT CGCTGCCCGA AGCGAAGATC CGCGGCTACA CGGCGTCGCG ATTTTCCTTC AACACCACCG GCGGACGCTG CCCCACCTGC GAGGGCGCGG GTCGGATCAA GCTCGAGATG GCGTTCATGC CGGACACTTA CCTGCCGTGC GACGACTGCC ACGGTCTGCG CTACGGCCCG GAGCTCGCGG ACATCACCTG GAAAGGCAAA AGCATCGGCG AGGTGCTGCA GCTCACGTTC GAGGAAGCCG CGCAGTTTTT CGACTTCCAC TCGCAGCTCG CGCAGGTCTG CCAGCTCATG GTCGATTGCG GCCTCGGCTA CCTCACGCTC GGCCAGTCGT CACCCACGCT CTCCGGCGGC GAAGCACAGC GGCTCAAGCT CGTGACCGAG CTTTCCGCCG GGCTCGCCAG CTACCGCGAG CGCAGTCGCG GCGAGCGTCC GCGCAATCTT TACCTACTTG AGGAGCCGAC CATCGGGCTC CACCTCAGCG ACTGCGAGAA ACTGATCCGC GTGCTGCACT CGCTCGTCGA TCAGGGGCAC ACAGTCATCG TGATCGAACA TCACCTCGAT CTGCTCGCCG AAGCCGACTA CATCGTCGAG CTTGGTCCGG TCGGCGGTCC GGATGGCGGC GAGCTACTCT ACCAAGGCGA ACTTGCCGGC TTGTTGAAGG TGCGCGGCAG TCCCACCGCC CCCTATCTCC GCGCGAAACT CAACGGCCAC CGCCGCGCCC AACCGTAG
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Protein sequence | MHAVVKSSRP APECIRLRGV RQNNLKGFDL DVPLGRYIAV TGLSGAGKSS LVFDTLHAEG QRRYVETFSA YTRQFLDLLN KPKVDSIENI RPSIAIEQTN TVKTSRSTVG TMTELTDFFK VWFSHVAECF DPETGEKVED DNPQSIWAKT SAAHPNRAVI VAFKVTKPAN LTWPEILQNL KAQSYVRVLL AAAAAATRNP PQLHRLEDLL SASSDPATIH PQLSGASELF VVQDRITIAA AEKPRFLEAV ETALHFGQGQ VHLFAADGFA ELGHFSRGLH SPKTGRTFRA ATPALFSFNS PLGACPHCRG FGRVIEIDYR LAVPDQSLSI DQGVIKCWES EIYGESKKDL YVFTKKKRIP TNVPFASLTP EQRDYVINGE PGYGEENGKT WPQYWYGVKG FFRWLEKNTY KMHVRVFLAR YRAYNPCPAC GGQRLQPEAL CWKWQGRTLP DLYQLPVSDL LAQLASKAAR HGHDTARKSD SRSETLAYDS IVTRLRYLEQ VGLGYLTLDR QSRTLSGGEV ERVNLTSCLG TSLVDTLFVL DEPSVGLHPR DIDRLIAIIR TLTNAGNTVV VVEHDEAMIR AADHVIEVGP EPGGRGGHIV FEGTVSEMLR SRESVTGAYF SGRETIETPA RRRPVSLGAR ASRPQSANAA APSSSPQWLT FTDVSKHNLA HLTFRLPLGR FVCLSGVSGS GKSTLLDNVI YQGLLTQRLQ LAEDPAEIKA ITPAPDTAPF GELVLVDQSP LSKTPRSNPA LYSEAWELIR ELYARTPAAQ EAGFNSSSFS FNSGEGRCEH CQGLGYERVE MQFLSDVFVP CPICDGRRFK PEVLAIQWNG RSVADLLATS INDALPLFTE HPEIHRRLAA LETVGLGYLT LGQPLNTLSG GESQRLKLVR YLGDYTAQEV GSPYPNSAGA LLLLDEPTTG LHRHDVKRLL SVLHALVDRG HSVVVIEHNL DVLKSADWLI EIGPDAGANG GRIVAEGTPE DVAAANTATS PFLRAALEAE SGGRTPELKA AESAARNGAS ALQPSTSNLN SISSSLEIEG ARENNLKNLS VAIPHRQLSV VTGVSGSGKS TLAFDIVFAE GQRRFMESMS PYARQFVEQL PRPAVDRLTG IPPTVAIEQR VTRGSRKSTV ATITEVAQYL RLLYARLGIQ HHPETDQPVE PLSPAQLKSL LSRVLSENPK ARKARHLYLC APLIRGRKGH HQPIATWIAN QGYELMRADG QLTRVDAFQK LDRYREHDIE VVVADLKTGS PASRAKSKSS GSQLSAPSSR LSEALRLGKG SCFLLTERGE ILSWFSTTRT DIHTGESFPE LDPKHFSFNS PRGWCPTCRG HGRVFPWMLE PDEDAEDDPA ARLREFGIDS ADDVSDAGQP CPECHGARLN RIARAVKLHF KAPGRRGRRA PARASQPSAL NSQPTYALSL PELLTSTPAH LLAHLRELDL DARGRLITQD IIPQIEERLR FLDHVGLGYL SLERPTETLS GGEAQRIRLA AQLGSNLSGV LYVLDEPSIG LHARDNDRLI ETLQSLREKG NTLLVVEHDD ELMERADRII DLGPAAGVHG GELLANGTPA EIKRSAKSLT GLFLKKGIAH PLRGEYRPAM WHGRLARVAT RAKAKLTGGT PVPQQWLELR GALFRNLKGF DLRLPLGRLI MVAGPSGAGK STLFRDVLDP AVSFAIKEQK ASLTGREFVK ATGFVVADSH LSTLSTQLPF AELRGANGFK RVIEVDQSPI GKTPRSTPAT YLGIFDLIRQ FFASLPEAKI RGYTASRFSF NTTGGRCPTC EGAGRIKLEM AFMPDTYLPC DDCHGLRYGP ELADITWKGK SIGEVLQLTF EEAAQFFDFH SQLAQVCQLM VDCGLGYLTL GQSSPTLSGG EAQRLKLVTE LSAGLASYRE RSRGERPRNL YLLEEPTIGL HLSDCEKLIR VLHSLVDQGH TVIVIEHHLD LLAEADYIVE LGPVGGPDGG ELLYQGELAG LLKVRGSPTA PYLRAKLNGH RRAQP
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