| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2622 |
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| Symbol | |
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| ID | 6207609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3364050 |
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| End bp | 3365495 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692282 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001819503 |
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| Protein GI | 182414437 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.969992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCA AGAATCGCAT TGTCCTCATT GGTTTTGGCG TCGTCGCGCG CGCGCTGCTT
CCGCTCTTGA TCAAGCATCT GCGCGTCGCG CCGGCTCGTA TCGTCGTCAT CGACTTCGCG
AATCGGGAAG CCGCGCTCCA GCCGTGGATC GCGAAAGGCC TGAAGTTTAT CCATGAACGG
GTCACCCCGT TCAGCTTGGC GCGGCTGTTG TCATCGCATG CCGGCCGCGG CGATCTGATC
GTCGATCTGG CCTGGAGCAT CGACTTCTTC GACATCGCGC GCTGGGCGCA CGAGAACGAG
GTCGTCTACG TCAACGCCTC GCTCGAGTCG TGGGATCCCG GTGAGGAGAT GCAGCGCAAG
ACGCCATTCG AGAAGTCGCT CTACGCCCGT TACGCGAAAC TGCTGCCGTT GCGCGAAGCG
TGGCGCGGTG CGACGACGGC GCTCGTCGAT CAGGGGGCGA ATCCCGGATT GATCTCGCCG
TTCGTCAAAG CCGGGCTGCT CGACATCGCG GCGGCCGTGG TCGAGGAAAA GAAAGTTCCC
GGCCCGATCG TGCGACGATT GCGGCAGGCG AGCCAGGCGG GGAATTTCGC CGAGTTGGCC
CGCACGCTCG GCGTCAAAAC GATTCACTGC AGCGAGTGGG ACACCCAGCG CTCGAACGTG
GCGAAGTCGC CGGACGAGTT CGTGTCGACA TGGAGCCCCG ACGCGATGTG GGAGGAATCC
ATCTCGCCTT CGGAGCTCGG CTGGGGGACG CACGAAAAGC AGCTGCCGCC CGCGGCGCTG
CAGCCGGAAG TCGGACCACG CAATCAGATC ATCCTGCCGC ACATGGGCCT CAACACCTGG
GTGCGCTCGT GGGTGCCGAA CCAGGAGATC GTCGGAATGC TGATGGCGCA CGGCGAATCG
TTCGGATTGT CGCACGCGCT GACGGTGTAC AAGAACGGCC GGCCGGTTTA TCGGCCGACA
GTCAACTACT CGTACATGCC CTGTGCGGAC AGCCTCGTCT CATTGCACGA GCTGCGCGCC
CGCAACTACG AGCTGCACCC CAAGACGCGG ATTCCGACCG ACGAGATCGT GGCGGGGACG
GACGTCGTGG GCGCATTGAT CATGGGGCAC CCATTCGGCG CCTGGTGGAT CGGGAGCATT
CTCTCGATCG ACGAGGCCCG GAAGAAAGTG CCCGGCTGCA ATGCGACGGC GTTGCAGGTC
GCGAGCGGCG TGCTCGCGGG TACGTTGTGG GCGCTGCGCA ATCCCCGCGC GGGCCTCCGG
CTGCCCGAGG ACCTCCCGCA TCGCGAGATT CTCGATACCG CCCGCCCGTA TCTGGGGCAG
TTCGTGTCGG TTCGGTCCGA TTGGACGCCG CTCAGCCGGC ACCGCGAATA TTTCACCGAC
GGTCCCGCCA GCACGGTCGA CCGATCGGAT CCCTGGCAGT TTCAAAACTT CATCTTCAAA
CCCTAG
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| Protein sequence | MEFKNRIVLI GFGVVARALL PLLIKHLRVA PARIVVIDFA NREAALQPWI AKGLKFIHER
VTPFSLARLL SSHAGRGDLI VDLAWSIDFF DIARWAHENE VVYVNASLES WDPGEEMQRK
TPFEKSLYAR YAKLLPLREA WRGATTALVD QGANPGLISP FVKAGLLDIA AAVVEEKKVP
GPIVRRLRQA SQAGNFAELA RTLGVKTIHC SEWDTQRSNV AKSPDEFVST WSPDAMWEES
ISPSELGWGT HEKQLPPAAL QPEVGPRNQI ILPHMGLNTW VRSWVPNQEI VGMLMAHGES
FGLSHALTVY KNGRPVYRPT VNYSYMPCAD SLVSLHELRA RNYELHPKTR IPTDEIVAGT
DVVGALIMGH PFGAWWIGSI LSIDEARKKV PGCNATALQV ASGVLAGTLW ALRNPRAGLR
LPEDLPHREI LDTARPYLGQ FVSVRSDWTP LSRHREYFTD GPASTVDRSD PWQFQNFIFK
P
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