| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2564 |
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| Symbol | |
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| ID | 6207541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3297515 |
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| End bp | 3299140 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692225 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001819446 |
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| Protein GI | 182414380 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.110127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGTC TGGCTGATCG CTGGCGACGA TTCCTGGCCT TGTACCGCAA GGAAATCTGG
CAGCCCGGCC AGTTGCAGGA GCGTACGCCG CGCGGCATGC TCTACGCGCT GCTGCGGATC
GTCTCGATCA CATGGACGGT TTTCTGCGAA ACGAAGGCCG CCAGCCGCGC CGCCGCACTG
AGCTTCAGCT CCCTTCTCGG CCTGGGTCCG CTGGTCGCAC TCACCGTCCT GATCGCCGGC
TTCGCCCTCA ACAAGGATGA TCCGAATCTC GCCGCCAACG CGCTGAGCCG CCTCATCAAC
TTCGTCGCGC CGCAGGTCGG CCAATACAGC CGGCTCGACG AGGAGCGCGC GTCACGACCT
GCCGGGAGCG CGCGCGTCTC GCCCGCTCCG GTCGAAGCTG CGGGCGAGAC GCCCGCGCAC
CCAGGCTCCG CCTCCGCCGC GCCGACCGCT GCCCCGACGG CGCCCGCGCC GCCCCGGTTG
GAAGCCCGGC CCTTCCCCGA CGTCCGGCTC AATCCCCGCC TCGTGCAGAT GATGAACAAC
TTCATCAACC AGGGCCGCTC CGGGTCGGCG GGTACGGTCG GCTTCTTCGG CTTGGTGATC
ATCGTGCTGC TGCTGTTCAA AACGGTCGAG GACACGTTCA ACGAGATCTG GGGCGTGCGC
AGCGGTCGCG GCGTGCTGAT GCGGATCGTG TACTACTGGA CCACGCTCAC GCTGGGCGCC
GTGCTGTTCT TCGCCTCCGT GACGCTGTTG AGTGCCGGCG CGTTCTTCAG CGTATTCAAC
AACGCCCTCG CCGACCTGCC GTTCTCCGCG CAAATGGCCG CGATGCTGCA ATGGTCGCTG
CCCGCGCTTT CGTTCACGCT CGTAGCGCTG CTGCTCACGA TTTTCTACCG GGTCATTCCG
CACACCCGCG TGTTCTGGCG CTCGGCGTTC ACCGGCGCGA TCGTCGTCGC CGCGCTGCTG
ATGCTGAACC ATTATCTCGC GTTCCTTTAT GTGCGACGCG TGATCCTCAC CGAAAGCCTC
TACGGCTCGC TGGGCCTGCC GCTGGTGATG ATGTTCGGCT TGTACATCTT CTGGCTCTAC
GTGCTGATCG GCGGCCAGAT CAGCTACGCG GTCCAGAACG TCCATTTCCG CAACAGCCAG
GCCGCCTGGG GCAACCTCTC GCAATCGATG CGCGAGCGAT TGCTGCTGGT GGTCCTGCTG
ACGATCTGCC GGCGGTTTCG CGACTGCCGC CCCCCGATGA CCACCTCCGA ACTCGGCGAG
ATGATCAAGG TGCCGACCCA GATTCTCAAC GAGTGCCTCA ACCGGTTGGC CGACCTGCAG
CTCGTGACCG CGGTCCCCCC GCGGACACCC GACGACCCCA CGGACCTGCG CTATCAACCC
GCGCGACCGC TGAACCGGAT CACGCTGCGC GACTTCAAGC GGCTCGATGA CGATTTTGGC
GACAACCCCA TGGTCGGCGC GCTGGAGCAT ATCGATCCGG TCGTCGCCCA TTACCGGCAG
GCCGTCACCC ATACGACCGA AAGCGATTTT TTCTCGAAGT CGCTGGAGGA CCTGCTTGCG
GAACATCCGT TCGACGCGCC GCGGCTTCCG GACGGCGCCG GCGCACCTCC GGCCGCGAAC
GGCTGA
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| Protein sequence | MFRLADRWRR FLALYRKEIW QPGQLQERTP RGMLYALLRI VSITWTVFCE TKAASRAAAL
SFSSLLGLGP LVALTVLIAG FALNKDDPNL AANALSRLIN FVAPQVGQYS RLDEERASRP
AGSARVSPAP VEAAGETPAH PGSASAAPTA APTAPAPPRL EARPFPDVRL NPRLVQMMNN
FINQGRSGSA GTVGFFGLVI IVLLLFKTVE DTFNEIWGVR SGRGVLMRIV YYWTTLTLGA
VLFFASVTLL SAGAFFSVFN NALADLPFSA QMAAMLQWSL PALSFTLVAL LLTIFYRVIP
HTRVFWRSAF TGAIVVAALL MLNHYLAFLY VRRVILTESL YGSLGLPLVM MFGLYIFWLY
VLIGGQISYA VQNVHFRNSQ AAWGNLSQSM RERLLLVVLL TICRRFRDCR PPMTTSELGE
MIKVPTQILN ECLNRLADLQ LVTAVPPRTP DDPTDLRYQP ARPLNRITLR DFKRLDDDFG
DNPMVGALEH IDPVVAHYRQ AVTHTTESDF FSKSLEDLLA EHPFDAPRLP DGAGAPPAAN
G
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