Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2529 |
Symbol | |
ID | 6206362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3257612 |
End bp | 3258679 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641692189 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_001819411 |
Protein GI | 182414345 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0997912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGCATC GGGCATTTTC TTATACCGGT GATGGAACTC TGCCGGGTGG GCGGCGCGGG ACACTCGCGC CGTTCCGGTC CGCGCTGGCG CCTCAGACCT TTCTCAATCC CATCTTGCCG GCCCCCGCGC AGGATCCGCA CGTGCTTTTC CACGACGGGC TCTACCACTA CTGCGAGTCG ACCCCCGCCG GTATCTTTCT GCGCTCGGCG GCCAATTTCG TCGACCTTGC GCGTGCCCCG CGGCGATGGG TCTGGACGCC GCCGGCGCGC GGTCTGATGG CGAAGAACCT CTGGGCGCCG GAACTGCATC AGCTGGACGG GCGGTTCTAC ATTTACTTCG CCGCGGACGA CGGTCGGAAC GCGAATCATC GGATGTGGGT GCTCTCGGCC AGCGATCTGG GCGGACCCTT TTTGCTTGTC GGCCAACTCG AAACGGGCGG TTGGGCCATC GACGGCACGG TGTTTCCGCT GCACGGCGAA CGGTATTTCG TGTGGTCGGG CTGGCCGGGT CGCCGCAACG GACAACAAAA CCTCTACCTC GCGCGGATGC GCAGCCCGCT CGCGCTCGAG GGACCGCGCG TCCTTCTCAC CACGCCCGAC CAGCCTTGGG AGCGGCGCGG GCTGCCGCTG TGCGAAGGGC CACAGGTGTT GCAGCATCAC GGTCGCACGT TTCTCGTCTA TTCGGCGAGC GGTTCGTGGA CGGAAGACTA CTGTCTCGGG CTGCTCAGTC TCGAGGGTTT CGACGTGCTC GATCCGCGTT CGTGGCGCAA GCGCGGGCCG GTGTTTCACA AAACCGCGCA CGCGTGGGGC GTCGGCCACT GCGGATTCGC CACAACGCCG GACGGTAACG AGCACTGGCT CCTCTACCAC GCCAAGACCT CGCGTCAGCC GGGCTGGATC GACCGTGAGG TGCGCGCGCA GCGGTTCACC TGGAGCAGCG TGGGCGAGCC CGTGTTCGGC GAACCCGTTG CGCGCACGCT CGCGCAGCCG CGTCCCGCGG TGGATCTCGC GCCGCGCGCC GAAGCGCGTC CGGTCGTCAA CTTCCCGCCG CTCGCCCGCA GCGCCTAA
|
Protein sequence | MEHRAFSYTG DGTLPGGRRG TLAPFRSALA PQTFLNPILP APAQDPHVLF HDGLYHYCES TPAGIFLRSA ANFVDLARAP RRWVWTPPAR GLMAKNLWAP ELHQLDGRFY IYFAADDGRN ANHRMWVLSA SDLGGPFLLV GQLETGGWAI DGTVFPLHGE RYFVWSGWPG RRNGQQNLYL ARMRSPLALE GPRVLLTTPD QPWERRGLPL CEGPQVLQHH GRTFLVYSAS GSWTEDYCLG LLSLEGFDVL DPRSWRKRGP VFHKTAHAWG VGHCGFATTP DGNEHWLLYH AKTSRQPGWI DREVRAQRFT WSSVGEPVFG EPVARTLAQP RPAVDLAPRA EARPVVNFPP LARSA
|
| |