| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2465 |
|---|
| Symbol | |
|---|
| ID | 6204947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3169779 |
|---|
| End bp | 3170618 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692124 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_001819347 |
|---|
| Protein GI | 182414281 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
[COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.150245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAA CCCTGCGCCA AAGCCTCAAC GTCGGAGTCG CGACGACCGC TTATCCGGCC
ACGCCGCCGG AGGTTTCGAC CCGTGCGCGC GGCCGGCCGG AGATCGACTG GCCGGCGTGG
CAGGACGCCC GGCCGGCCGC GGCGATCTGT CCGACCGGCG CGATCAACTG CCGCGACGAA
GCGGGAGTGC GGACGGCGGA GCTCGACCTC GGGAAATGCA TTTTTTGCGG GCTGTGCGCA
GACGTGGACC GTGCGATCCG GATGACGAAT CAGTGCGAGC TGGCCGTCCG GACGCGGGAG
CGGCTGCGCT CGACTGCGCG CTACGAGCTG AGGCCCGACG GCACGCAGGC GCGGATGATC
GAAGCGCCGC AAATCTCTGA GACAGGAGAG AAAACGGAGG CGTTGGGCCG GGAACTGCAG
AACCGGATTC ATTCGTTGTT GGGCCGTTCG CTGCACATTC GGGAAGTTGA TGCCGGTTCG
TGCAACGGCT GCGAAGTCGA GATCAACGCC CTGAGCGGTC CGATCTACGA CTTGGAGCGG
TTTGGCATTC ATCTCGTGGC CTCGCCCCGG CATGCCGATA TGCTGCTCGT GACGGGCCCG
GTCACGCGCA ACATGGAACT CGCCCTGCGC AAGACCTACG ATGCGACACC CGAACCGCGG
CTCGTCGTCG CGGTGGGCGC CTGTGGTTGC AGTGGCGGGA TGTTCGGCCG AAACTACGCC
ACTTGCGGCA GCGTCGACTC GGTGCTGCCG GTGGACGTCT ACATTCCCGG TTGTCCGCCC
AATCCATTTG CACTGCTGCA CGGAATTTTG CTGGCGGTGG GCCGGCTGGA AAAACGATGA
|
|---|
| Protein sequence | MFETLRQSLN VGVATTAYPA TPPEVSTRAR GRPEIDWPAW QDARPAAAIC PTGAINCRDE
AGVRTAELDL GKCIFCGLCA DVDRAIRMTN QCELAVRTRE RLRSTARYEL RPDGTQARMI
EAPQISETGE KTEALGRELQ NRIHSLLGRS LHIREVDAGS CNGCEVEINA LSGPIYDLER
FGIHLVASPR HADMLLVTGP VTRNMELALR KTYDATPEPR LVVAVGACGC SGGMFGRNYA
TCGSVDSVLP VDVYIPGCPP NPFALLHGIL LAVGRLEKR
|
|---|
| |