Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2458 |
Symbol | |
ID | 6206402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 3160892 |
End bp | 3161533 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641692117 |
Product | NAD-dependent dehydrogenase subunit |
Protein accession | YP_001819340 |
Protein GI | 182414274 |
COG category | [C] Energy production and conversion |
COG ID | [COG4237] Hydrogenase 4 membrane component (E) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.124831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCA CGCTGAATCT TCTCATCGGA TTGGCGATGG GGCTAAACCT GCTCGCGCTC GCGAGCGGGC GGTTGCCGTC GGTGATTCGT GCGGTCGCCG TGCAGGGCAT GGTGCTGGGC GTGCTGCCGC TGTTGAGCGA AGGTCATGCG CACTGGTTGG TCTGGCTGGT GGCGGCGGGC ACGGTCGTCG TGAAAGGTTT CGTGATTCCG AACCTGCTCA CGCGAGCGAT GCGCGCGGCG AATATCGATC GCGAGATCGA GCCCTTCCTC GGGTTCGTGC CCTCGCTGCT GCTCGGCGCG GCGGGCACGA TCGCCGCCGT CGCGGGCGCG CGGGCGCTGC CGCTCCTGCC GCAACACGCG GACACGCTGC TCGTGCCCGG CGCATTGGCG ACGGTGTTGA CGGGGCTCCT GCTGCTGATC GGCCGCTCGA AGGCGATTTT GCAGGTGTGC GGCTATTTGA TGCTCGAGAA TGGCGTCTAC CTGTTCGGGC TCCTGCTGAT CGAATCCACG CCGCTACTCG TCGAGTCGGG CATCCTGCTC GACCTGACGG TGGGCGTGTT CGTGATCGGA ATCATCGTCG ACCGGATCCA GCGCGAGTTC GATACGCTGG ATACGCGGAA GCTGACGGTG CTGCGAGAGT GA
|
Protein sequence | MNSTLNLLIG LAMGLNLLAL ASGRLPSVIR AVAVQGMVLG VLPLLSEGHA HWLVWLVAAG TVVVKGFVIP NLLTRAMRAA NIDREIEPFL GFVPSLLLGA AGTIAAVAGA RALPLLPQHA DTLLVPGALA TVLTGLLLLI GRSKAILQVC GYLMLENGVY LFGLLLIEST PLLVESGILL DLTVGVFVIG IIVDRIQREF DTLDTRKLTV LRE
|
| |