Gene Oter_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2458 
Symbol 
ID6206402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3160892 
End bp3161533 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID641692117 
ProductNAD-dependent dehydrogenase subunit 
Protein accessionYP_001819340 
Protein GI182414274 
COG category[C] Energy production and conversion 
COG ID[COG4237] Hydrogenase 4 membrane component (E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.124831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA CGCTGAATCT TCTCATCGGA TTGGCGATGG GGCTAAACCT GCTCGCGCTC 
GCGAGCGGGC GGTTGCCGTC GGTGATTCGT GCGGTCGCCG TGCAGGGCAT GGTGCTGGGC
GTGCTGCCGC TGTTGAGCGA AGGTCATGCG CACTGGTTGG TCTGGCTGGT GGCGGCGGGC
ACGGTCGTCG TGAAAGGTTT CGTGATTCCG AACCTGCTCA CGCGAGCGAT GCGCGCGGCG
AATATCGATC GCGAGATCGA GCCCTTCCTC GGGTTCGTGC CCTCGCTGCT GCTCGGCGCG
GCGGGCACGA TCGCCGCCGT CGCGGGCGCG CGGGCGCTGC CGCTCCTGCC GCAACACGCG
GACACGCTGC TCGTGCCCGG CGCATTGGCG ACGGTGTTGA CGGGGCTCCT GCTGCTGATC
GGCCGCTCGA AGGCGATTTT GCAGGTGTGC GGCTATTTGA TGCTCGAGAA TGGCGTCTAC
CTGTTCGGGC TCCTGCTGAT CGAATCCACG CCGCTACTCG TCGAGTCGGG CATCCTGCTC
GACCTGACGG TGGGCGTGTT CGTGATCGGA ATCATCGTCG ACCGGATCCA GCGCGAGTTC
GATACGCTGG ATACGCGGAA GCTGACGGTG CTGCGAGAGT GA
 
Protein sequence
MNSTLNLLIG LAMGLNLLAL ASGRLPSVIR AVAVQGMVLG VLPLLSEGHA HWLVWLVAAG 
TVVVKGFVIP NLLTRAMRAA NIDREIEPFL GFVPSLLLGA AGTIAAVAGA RALPLLPQHA
DTLLVPGALA TVLTGLLLLI GRSKAILQVC GYLMLENGVY LFGLLLIEST PLLVESGILL
DLTVGVFVIG IIVDRIQREF DTLDTRKLTV LRE