| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2376 |
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| Symbol | |
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| ID | 6206508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3068356 |
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| End bp | 3068949 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692035 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_001819258 |
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| Protein GI | 182414192 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.278695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.316272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACG AATTCTTCGA TGTGGTAAAC GAGCGCGACG AGCCCGTCGG ACGGGCCCGG
CGCAGTGAGG TGCACGCGAA GGGCTGGCGC CACCGCGCGG TGCACGTGCT TGTGTTCGAC
CAGCACGGGC GGGTGTTCGT CCAAAAGCGT TCGATGAAAA AGGATTGCTC GCCGGGGTTG
TGGGACTCGT CCTGCTCGGG ACATTTGGAC GCGGGAGAGG ACTATGACGC GGCGGCCGTT
CGCGAGCTGG AAGAAGAGCT CGGAATGAAG GTGTCAGCGC CCCCCAAACG CTGGTTTCGG
ATCGAGGCCT GTGAGGAAAC GGGGCAGGAG TTCTGCTGGA TTTACTGGCT GCGGGCGAAC
GGCCCGTTCG TGCTCCATCC GGAAGAGATC GATGGTGGAG ACTGGCTCAC GCCGGACGAA
CTTACGGCCC GGGTCGCGGC CCGTCCGGGC GACTACTGCA CGTCTTTTCG TTTGATTTGG
GAACGCGCCC GCCGCGAAGG CATGCCCGCG CAACCGCAAC CCGCGCCCAC TGCGGTGTCG
CACCACCCGT TGGCCGCGCT ACGCCGCGTC ACCGCATCTC GCGGAGTTGC CTGA
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| Protein sequence | MADEFFDVVN ERDEPVGRAR RSEVHAKGWR HRAVHVLVFD QHGRVFVQKR SMKKDCSPGL
WDSSCSGHLD AGEDYDAAAV RELEEELGMK VSAPPKRWFR IEACEETGQE FCWIYWLRAN
GPFVLHPEEI DGGDWLTPDE LTARVAARPG DYCTSFRLIW ERARREGMPA QPQPAPTAVS
HHPLAALRRV TASRGVA
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